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    THAPSDRAFT_36858 hypothetical protein [ Thalassiosira pseudonana CCMP1335 ]

    Gene ID: 7447522, updated on 21-Dec-2023

    Summary

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    Gene symbol
    THAPSDRAFT_36858
    Gene description
    hypothetical protein
    Locus tag
    THAPSDRAFT_36858
    Gene type
    protein coding
    RNA name
    predicted protein
    RefSeq status
    PROVISIONAL
    Organism
    Thalassiosira pseudonana CCMP1335 (strain: CCMP1335)
    Lineage
    Eukaryota; Stramenopiles; Bacillariophyta; Coscinodiscophyceae; Thalassiosirophycidae; Thalassiosirales; Thalassiosiraceae; Thalassiosira
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    Genomic context

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    See THAPSDRAFT_36858 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    3
    Sequence:
    Chromosome: 12; NC_012075.1 (384806..386251, complement)

    Chromosome 12 - NC_012075.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene histone acetyltransferase gcn5-type hat Neighboring gene hypothetical protein Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_012075.1

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. The genome of the diatom Thalassiosira pseudonana: ecology, evolution, and metabolism. Armbrust EV, et al. Science, 2004 Oct 1. PMID 15459382
    2. The Phaeodactylum genome reveals the evolutionary history of diatom genomes. Bowler C, et al. Nature, 2008 Nov 13. PMID 18923393

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Names
    hypothetical protein

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_012075.1 Reference assembly

      Range
      384806..386251 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002293136.1 → XP_002293172.1  predicted protein, partial [Thalassiosira pseudonana CCMP1335]

      See identical proteins and their annotated locations for XP_002293172.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      B8CA76
      Conserved Domains (2) summary
      cd06174
      Location:11 → 438
      MFS; The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of ...
      TIGR00893
      Location:16 → 437
      2A0114; D-galactonate transporter
    Nucleotide Protein
    Heading Accession and Version

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