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    LOC108743382 transcription factor 21 [ Agrilus planipennis (emerald ash borer) ]

    Gene ID: 108743382, updated on 21-Dec-2023

    Summary

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    Gene symbol
    LOC108743382
    Gene description
    transcription factor 21
    See related
    EnsemblRapid:LOC108743382
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Agrilus planipennis
    Lineage
    Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Coleoptera; Polyphaga; Elateriformia; Buprestoidea; Buprestidae; Agrilinae; Agrilus
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    Genomic context

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    Location:
    chromosome: Un
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    101 current Apla_2.0 (GCF_000699045.2) Unplaced Scaffold NW_020439056.1 (60770..64919, complement)
    100 previous assembly Apla_1.0 (GCF_000699045.1) Unplaced Scaffold NW_017260146.1 (60720..64869, complement)

    NW_020439056.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC108743381 Neighboring gene uncharacterized LOC108743369 Neighboring gene sodium-dependent serotonin transporter Neighboring gene E3 ubiquitin-protein ligase RBBP6

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein dimerization activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in developmental process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transcription factor 21; uncharacterized protein LOC108743382

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Agrilus planipennis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Apla_2.0 Primary Assembly

    Genomic

    1. NW_020439056.1 Reference Apla_2.0 Primary Assembly

      Range
      60770..64919 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_018478943.1 → XP_018334445.1  transcription factor 21 isoform X3

      UniProtKB/TrEMBL
      A0A1W4XPW7
      Related
      XP_018334445.1, XM_018478943.1

    2. XM_018478942.2 → XP_018334444.1  transcription factor 21 isoform X2

      UniProtKB/TrEMBL
      A0A1W4XEK4
      Related
      XP_018334444.1, XM_018478942.2

    3. XM_018478940.2 → XP_018334442.1  transcription factor 21 isoform X2

      UniProtKB/TrEMBL
      A0A1W4XEK4
      Related
      XP_018334442.1, XM_018478940.2

    4. XM_018478939.2 → XP_018334441.1  uncharacterized protein LOC108743382 isoform X1

      UniProtKB/TrEMBL
      A0A1W4XE79
      Related
      XP_018334441.1, XM_018478939.2
    Nucleotide Protein
    Heading Accession and Version

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