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    SCN2A sodium voltage-gated channel alpha subunit 2 [ Tursiops truncatus (common bottlenose dolphin) ]

    Gene ID: 101334610, updated on 8-Mar-2024

    Summary

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    Gene symbol
    SCN2A
    Gene description
    sodium voltage-gated channel alpha subunit 2
    See related
    EnsemblRapid:ENSTTRG00000005563
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Tursiops truncatus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Whippomorpha; Cetacea; Odontoceti; Delphinidae; Tursiops
    Orthologs
    human all
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    Genomic context

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    See SCN2A in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    102 current mTurTru1.mat.Y (GCF_011762595.1) 7 NC_047040.1 (66259352..66351742, complement)
    101 previous assembly NIST Tur_tru v1 (GCF_001922835.1) Unplaced Scaffold NW_017844625.1 (82588421..82728139, complement)

    Chromosome 7 - NC_047040.1Genomic Context describing neighboring genes Neighboring gene cysteine and serine rich nuclear protein 3 Neighboring gene 40S ribosomal protein S4-like Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene sodium voltage-gated channel alpha subunit 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables voltage-gated sodium channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in membrane depolarization during action potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in neuronal action potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sodium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of voltage-gated sodium channel complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium channel protein type 2 subunit alpha

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Tursiops truncatus Annotation Release 102 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mTurTru1.mat.Y Primary Assembly

    Genomic

    1. NC_047040.1 Reference mTurTru1.mat.Y Primary Assembly

      Range
      66259352..66351742 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004314501.3 → XP_004314549.2  sodium channel protein type 2 subunit alpha

      UniProtKB/TrEMBL
      A0A2U3V150
      Related
      ENSTTRP00000029526.1, ENSTTRT00000028547.1
      Conserved Domains (5) summary
      cd13433
      Location:1475 → 1527
      Na_channel_gate; Inactivation gate of the voltage-gated sodium channel alpha subunits
      pfam00520
      Location:1208 → 1483
      Ion_trans; Ion transport protein
      pfam06512
      Location:998 → 1204
      Na_trans_assoc; Sodium ion transport-associated
      pfam11933
      Location:514 → 697
      Na_trans_cytopl; Cytoplasmic domain of voltage-gated Na+ ion channel
      pfam16905
      Location:1791 → 1854
      GPHH; Voltage-dependent L-type calcium channel, IQ-associated
    Nucleotide Protein
    Heading Accession and Version

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