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    NEWENTRY Record to support submission of GeneRIFs for a gene not in Gene (Desulfitobacterium frappieri. Use when strain, subtype, isolate, etc. is unspecified, or when different from all specified ones in Gene.). [ Desulfitobacterium hafniense ]

    Gene ID: 3968879, updated on 11-Jan-2023

    Summary

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    Gene symbol
    NEWENTRY
    Gene description
    Record to support submission of GeneRIFs for a gene not in Gene (Desulfitobacterium frappieri. Use when strain, subtype, isolate, etc. is unspecified, or when different from all specified ones in Gene.).
    Gene type
    other
    Organism
    Desulfitobacterium hafniense
    Lineage
    Bacteria; Bacillota; Clostridia; Eubacteriales; Desulfitobacteriaceae; Desulfitobacterium
    Also known as
    NEWENTRY
    NEW
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    Bibliography

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    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. The tetrameric structure of nucleotide-regulated pyrophosphatase and its modulation by deletion mutagenesis and ligand binding.
      Title: The tetrameric structure of nucleotide-regulated pyrophosphatase and its modulation by deletion mutagenesis and ligand binding.
    2. substrate specificity of Desulfitobacterium hafnience PylRS [PylRS]
      Title: Pyrrolysine analogs as substrates for bacterial pyrrolysyl-tRNA synthetase in vitro and in vivo.
    3. These data define PceT (and more generally the new RdhT family) as a class of TF-like chaperones involved in the maturation of proteins secreted by the twin-arginine translocation pathway.[PceT]
      Title: Redundancy and specificity of multiple trigger factor chaperones in Desulfitobacteria.
    4. (pyrrolysine tRNA synthetase) The origin of allostery and half-sites reactivity of activated pyrrolysine tRNA synthetase lies in subtle rearrangements of interactions and dynamics at a global level.
      Title: Probing the allosteric mechanism in pyrrolysyl-tRNA synthetase using energy-weighted network formalism.
    5. Mass spectrometry analysis identified the the 47-kDa protein as the putative chlorophenol reductive dehalogenase CprA3.[CprA3]
      Title: Identification and characterization of a novel CprA reductive dehalogenase specific to highly chlorinated phenols from Desulfitobacterium hafniense strain PCP-1.
    6. crystal structure of Dhaf4260 from Desulfitobacterium hafniense DCB-2 was determined by single-wavelength anomalous diffraction (SAD) to a resolution of 2.01 A[Dhaf4260 ]
      Title: Structure of the first representative of Pfam family PF04016 (DUF364) reveals enolase and Rossmann-like folds that combine to form a unique active site with a possible role in heavy-metal chelation.
    7. Desulfitobacterium hafniense PylRS-tRNA(Pyl) is an orthogonal pair in vitro and in vivo, and present the crystal structure of this orthogonal pair [Pyrrolysyl-tRNA synthetase]
      Title: Pyrrolysyl-tRNA synthetase-tRNA(Pyl) structure reveals the molecular basis of orthogonality.
    8. The transcriptional regulator CprK induces expression of halorespiratory genes and is reversibly inactivated by oxygen. [CprK]
      Title: Molecular basis of halorespiration control by CprK, a CRP-FNR type transcriptional regulator.
    9. The apo 2.1A resolution structure of the intact D. hafniense pyrrolysyl-tRNA synthetase (PylS)was reported. (PylS)
      Title: Structure of Desulfitobacterium hafniense PylSc, a pyrrolysyl-tRNA synthetase.
    10. The activation and aminoacylation properties of D. hafniense Pyrrolysyl-tRNA synthetase and the nature of the pyrrolysine tRNA identity elements were determined (Pyrrolysyl-tRNA synthetase).
      Title: Recognition of pyrrolysine tRNA by the Desulfitobacterium hafniense pyrrolysyl-tRNA synthetase.
    Submit: New GeneRIF Correction See all GeneRIFs (11)

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    Research Materials