U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    AT5G66675 transmembrane protein, putative (DUF677) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836800, updated on 15-Feb-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    AT5G66675
    Gene description
    transmembrane protein, putative (DUF677)
    Primary source
    Araport:AT5G66675
    Locus tag
    AT5G66675
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    Location:
    chromosome: 5
    Exon count:
    3
    Sequence:
    Chromosome: 5; NC_003076.8 (26614809..26617034, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene pectinesterase, putative (DUF677) Neighboring gene ncRNA Neighboring gene dolichyl-diphosphooligosaccharide-protein glycosyltransferase 48kDa subunit family protein Neighboring gene UDP-Glycosyltransferase superfamily protein

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714
    2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    NM_001345800.1
    NM_180598.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

    Go to the top of the page Help
    Preferred Names
    transmembrane protein, putative (DUF677)
    NP_850929.1
    • Protein of unknown function (DUF677); CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF677 (InterPro:IPR007749); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF677) (TAIR:AT2G18630.1); Has 241 Blast hits to 232 proteins in 16 species: Archae - 0; Bacteria - 3; Metazoa - 0; Fungi - 0; Plants - 237; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      26614809..26617034 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001345798.1 → NP_001331714.1  transmembrane protein, putative (DUF677) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GW16
      UniProtKB/TrEMBL
      A0A178U9S8
      Conserved Domains (1) summary
      pfam05055
      Location:55 → 392
      DUF677; Protein of unknown function (DUF677)

    2. NM_001345799.1 → NP_001331713.1  transmembrane protein, putative (DUF677) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GW16
      UniProtKB/TrEMBL
      A0A178U9S8
      Conserved Domains (1) summary
      pfam05055
      Location:55 → 392
      DUF677; Protein of unknown function (DUF677)

    3. NM_180598.3 → NP_850929.1  transmembrane protein, putative (DUF677) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850929.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GW16
      UniProtKB/TrEMBL
      A0A178U9S8
      Conserved Domains (1) summary
      pfam05055
      Location:55 → 392
      DUF677; Protein of unknown function (DUF677)

    4. NM_001345800.1 → NP_001331715.1  transmembrane protein, putative (DUF677) [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GW16
      UniProtKB/TrEMBL
      A0A178U9S8
      Conserved Domains (1) summary
      pfam05055
      Location:55 → 392
      DUF677; Protein of unknown function (DUF677)
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8GW16.1

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Tools