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    CXE20 carboxyesterase 20 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 836339, updated on 15-Feb-2024

    Summary

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    Gene symbol
    CXE20
    Gene description
    carboxyesterase 20
    Primary source
    Araport:AT5G62180
    Locus tag
    AT5G62180
    See related
    TAIR:AT5G62180
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    AtCXE20; carboxyesterase 20; MMI9.26
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    Genomic context

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    See CXE20 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    1
    Sequence:
    Chromosome: 5; NC_003076.8 (24978718..24980075, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene AGAMOUS-like 42 Neighboring gene LOW protein: M-phase inducer phosphatase-like protein Neighboring gene DEAD box RNA helicase (PRH75) Neighboring gene Embryo-specific protein 3, (ATS3)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Arabidopsis Carboxylesterase 20 Binds Strigolactone and Increases Branches and Tillers When Ectopically Expressed in Arabidopsis and Maize. Roesler K, et al. Front Plant Sci, 2021. PMID 33986761, Free PMC Article
    2. Structure activity studies with xenobiotic substrates using carboxylesterases isolated from Arabidopsis thaliana. Cummins I, et al. Phytochemistry, 2007 Mar. PMID 17270225
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714
    4. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_125612.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 4-hydroxyphenylacetate decarboxylase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    NOT enables carboxylesterase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    carboxyesterase 20
    NP_201024.1
    • carboxyesterase 20 (CXE20); INVOLVED IN: metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower; EXPRESSED DURING: petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-3 (InterPro:IPR013094); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G45600.1); Has 9350 Blast hits to 9331 proteins in 1590 species: Archae - 113; Bacteria - 5436; Metazoa - 449; Fungi - 960; Plants - 1345; Viruses - 3; Other Eukaryotes - 1044 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      24978718..24980075 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_125612.3 → NP_201024.1  carboxyesterase 20 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_201024.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LVB8
      UniProtKB/TrEMBL
      A0A5S9YG98, A0A654GDE8
      Conserved Domains (1) summary
      pfam07859
      Location:83 → 303
      Abhydrolase_3; alpha/beta hydrolase fold
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LVB8.1

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