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    AT5G48440 FAD-dependent oxidoreductase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834899, updated on 15-Feb-2024

    Summary

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    Gene symbol
    AT5G48440
    Gene description
    FAD-dependent oxidoreductase family protein
    Primary source
    Araport:AT5G48440
    Locus tag
    AT5G48440
    See related
    TAIR:AT5G48440
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    MJE7.7; MJE7_7
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    Genomic context

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    See AT5G48440 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    9
    Sequence:
    Chromosome: 5; NC_003076.8 (19629658..19632775, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene Eukaryotic aspartyl protease family protein Neighboring gene ncRNA Neighboring gene SKU5 similar 3 Neighboring gene Actin binding Calponin homology (CH) domain-containing protein Neighboring gene tRNA-Lys

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001344772.1
    NM_124219.5
    NM_203177.2

    Gene Ontology Provided by TAIR

    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    FAD-dependent oxidoreductase family protein
    NP_199655.3
    • FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 8923 Blast hits to 8893 proteins in 1586 species: Archae - 100; Bacteria - 6746; Metazoa - 279; Fungi - 106; Plants - 79; Viruses - 0; Other Eukaryotes - 1613 (source: NCBI BLink).
    NP_974906.2
    • FAD-dependent oxidoreductase family protein; FUNCTIONS IN: oxidoreductase activity; LOCATED IN: chloroplast; EXPRESSED IN: guard cell; CONTAINS InterPro DOMAIN/s: FAD dependent oxidoreductase (InterPro:IPR006076); Has 4216 Blast hits to 4216 proteins in 1050 species: Archae - 57; Bacteria - 3005; Metazoa - 218; Fungi - 66; Plants - 52; Viruses - 0; Other Eukaryotes - 818 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      19629658..19632775 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_124219.5 → NP_199655.3  FAD-dependent oxidoreductase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199655.3

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YCF2, Q9LV69
      Conserved Domains (1) summary
      pfam01266
      Location:52 → 438
      DAO; FAD dependent oxidoreductase

    2. NM_001344772.1 → NP_001331065.1  FAD-dependent oxidoreductase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8BCQ6

    3. NM_203177.2 → NP_974906.2  FAD-dependent oxidoreductase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_974906.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9YCF2, F4K1P8
      Conserved Domains (1) summary
      pfam01266
      Location:52 → 398
      DAO; FAD dependent oxidoreductase
    Nucleotide Protein
    Heading Accession and Version

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