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    AT5G44660 uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 834495, updated on 15-Feb-2024

    Summary

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    Gene symbol
    AT5G44660
    Gene description
    uncharacterized protein
    Primary source
    Araport:AT5G44660
    Locus tag
    AT5G44660
    See related
    TAIR:AT5G44660
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    K15C23.11; K15C23_11
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    Genomic context

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    See AT5G44660 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (18015522..18017307)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene beta glucosidase 13 Neighboring gene death domain associated protein Neighboring gene glycosyltransferase family protein (DUF23) Neighboring gene DNA glycosylase superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714
    2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001344571.1
    NM_123833.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in photosystem I assembly IEA
    Inferred from Electronic Annotation
    more info
    		  
    involved_in response to photooxidative stress IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in chloroplast thylakoid membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_001318740.1
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G20190.1); Has 944 Blast hits to 462 proteins in 141 species: Archae - 2; Bacteria - 370; Metazoa - 161; Fungi - 102; Plants - 64; Viruses - 6; Other Eukaryotes - 239 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      18015522..18017307
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344571.1 → NP_001318740.1  uncharacterized protein AT5G44660 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UJE3, A0A384KFK2, Q9LU00

    2. NM_123833.4 → NP_199279.1  uncharacterized protein AT5G44660 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_199279.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178UJE3, A0A384KFK2, Q9LU00
    Nucleotide Protein
    Heading Accession and Version

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