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    AT5G18710 DNAJ heat shock amino-terminal domain protein, putative (DUF3444) [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 831989, updated on 7-Sep-2023

    Summary

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    Gene symbol
    AT5G18710
    Gene description
    DNAJ heat shock amino-terminal domain protein, putative (DUF3444)
    Primary source
    Araport:AT5G18710
    Locus tag
    AT5G18710
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T1A4.90; T1A4_90
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    Genomic context

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    See AT5G18710 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    2
    Sequence:
    Chromosome: 5; NC_003076.8 (6241134..6243479)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene arabinogalactan protein 25 Neighboring gene kinase family with ARM repeat domain-containing protein Neighboring gene uncharacterized protein Neighboring gene DNAJ heat shock amino-terminal domain protein, putative (DUF3444) Neighboring gene DNAJ heat shock amino-terminal domain protein Neighboring gene uncharacterized protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_121876.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    DNAJ heat shock amino-terminal domain protein, putative (DUF3444)
    NP_197372.4
    • Domain of unknown function (DUF3444); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G18730.1); Has 358 Blast hits to 276 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 358; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      6241134..6243479
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_121876.5 → NP_197372.4  DNAJ heat shock amino-terminal domain protein, putative (DUF3444) [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_197372.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4JY38
      Conserved Domains (1) summary
      pfam11926
      Location:12 → 207
      DUF3444; Domain of unknown function (DUF3444)
    Nucleotide Protein
    Heading Accession and Version

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