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    NAC071 NAC domain containing protein 71 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 827523, updated on 18-Sep-2024

    Summary

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    Official Symbol
    NAC071
    Official Full Name
    NAC domain containing protein 71
    Primary source
    TAIR:AT4G17980
    Locus tag
    AT4G17980
    See related
    Araport:AT4G17980
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    anac071; NAC domain containing protein 71; T6K21.160; T6K21_160
    Summary
    Encodes ANAC071, a transcription factor involved in cell proliferation in incised inflorescence stems.
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    Genomic context

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    See NAC071 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (9978703..9980555, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene aluminum-activated, malate transporter 12 Neighboring gene tRNA-Cys Neighboring gene uncharacterized protein Neighboring gene myo-inositol polyphosphate 5-phosphatase 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Wound-inducible ANAC071 and ANAC096 transcription factors promote cambial cell formation in incised Arabidopsis flowering stems. Matsuoka K, et al. Commun Biol, 2021 Mar 19. PMID 33742091, Free PMC Article
    2. Spatially selective hormonal control of RAP2.6L and ANAC071 transcription factors involved in tissue reunion in Arabidopsis. Asahina M, et al. Proc Natl Acad Sci U S A, 2011 Sep 20. PMID 21911380, Free PMC Article
    3. XTH20 and XTH19 regulated by ANAC071 under auxin flow are involved in cell proliferation in incised Arabidopsis inflorescence stems. Pitaksaringkarn W, et al. Plant J, 2014 Nov. PMID 25182467
    4. Arabidopsis transcription factors: genome-wide comparative analysis among eukaryotes. Riechmann JL, et al. Science, 2000 Dec 15. PMID 11118137
    5. CrY2H-seq: a massively multiplexed assay for deep-coverage interactome mapping. Wanamaker SA, et al. Nat Methods, 2017 Aug. PMID 28650476, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Wound-inducible ANAC071 and ANAC096 transcription factors promote cambial cell formation in incised Arabidopsis flowering stems.
      Title: Wound-inducible ANAC071 and ANAC096 transcription factors promote cambial cell formation in incised Arabidopsis flowering stems.
    2. XTH20 and XTH19 are regulated by auxin via ANAC071 in the distal part of an incised stem and are involved in cell proliferation in the tissue reunion process.ANAC071 bound to the XTH20 and XTH19 promoters to induce their expression.
      Title: XTH20 and XTH19 regulated by ANAC071 under auxin flow are involved in cell proliferation in incised Arabidopsis inflorescence stems.
    3. Data show that two plant-specific transcription factor genes, ANAC071 (At4g17980) and RAP2.6L (At5g13330) were abundantly expressed.
      Title: Spatially selective hormonal control of RAP2.6L and ANAC071 transcription factors involved in tissue reunion in Arabidopsis.
    Submit: New GeneRIF Correction

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_117908.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables DNA-binding transcription factor activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables DNA-binding transcription factor activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    enables sequence-specific DNA binding IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    Process Evidence Code Pubs
    acts_upstream_of_or_within cell division IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within cellular response to auxin stimulus IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within response to wounding IEP
    Inferred from Expression Pattern
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    NAC domain containing protein 71
    NP_193532.1
    • NAC domain containing protein 71 (NAC071); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 96 (TAIR:AT5G46590.1); Has 2972 Blast hits to 2965 proteins in 75 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 2972; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      9978703..9980555 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001341249.1 → NP_001329603.1  NAC domain containing protein 71 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178V7V6, A0A1L7NZ99, A0A5S9XTH1
      Conserved Domains (1) summary
      pfam02365
      Location:7 → 135
      NAM; No apical meristem (NAM) protein

    2. NM_117908.2 → NP_193532.1  NAC domain containing protein 71 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_193532.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O49697
      UniProtKB/TrEMBL
      A0A178V7V6
      Conserved Domains (1) summary
      pfam02365
      Location:7 → 135
      NAM; No apical meristem (NAM) protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    O49697.1

    Gene LinkOut

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