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    AT3G06710 E3 ubiquitin ligase [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819856, updated on 15-Oct-2023

    Summary

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    Gene symbol
    AT3G06710
    Gene description
    E3 ubiquitin ligase
    Primary source
    Araport:AT3G06710
    Locus tag
    AT3G06710
    See related
    TAIR:AT3G06710
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T8E24.2
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    Genomic context

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    See AT3G06710 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (2118169..2120181)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene putative acyl-coenzyme A oxidase Neighboring gene Ribosomal L29e protein family Neighboring gene importin alpha isoform 1 Neighboring gene Thioredoxin z Neighboring gene GATA transcription factor 15

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713

    GeneRIFs: Gene References Into Functions

    General gene information

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    NM_111551.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in biological_process ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    E3 ubiquitin ligase
    NP_187327.2
    • FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: RING/FYVE/PHD zinc finger superfamily protein (TAIR:AT4G32670.1); Has 15 Blast hits to 15 proteins in 3 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 0; Plants - 12; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      2118169..2120181
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111551.4 → NP_187327.2  E3 ubiquitin ligase [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_187327.2

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XAX9, Q6E260
    Nucleotide Protein
    Heading Accession and Version

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