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    GASA1 GAST1 protein homolog 1 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843908, updated on 15-Oct-2023

    Summary

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    Gene symbol
    GASA1
    Gene description
    GAST1 protein homolog 1
    Primary source
    Araport:AT1G75750
    Locus tag
    AT1G75750
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F10A5.6; F10A5_6; GAST1 protein homolog 1
    Summary
    GA-responsive GAST1 protein homolog regulated by BR and GA antagonistically. Possibly involved in cell elongation based on expression data
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    Genomic context

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    See GASA1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    3
    Sequence:
    Chromosome: 1; NC_003070.9 (28441501..28442435, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene tRNA-Thr Neighboring gene ER lumen protein retaining receptor family protein Neighboring gene uncharacterized protein Neighboring gene tubulin beta-1 chain

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Fusion genetic analysis of gibberellin signaling mutants. Raventos D, et al. Plant J, 2000 Jun. PMID 10849358
    2. GASA, a gibberellin-regulated gene family from Arabidopsis thaliana related to the tomato GAST1 gene. Herzog M, et al. Plant Mol Biol, 1995 Feb. PMID 7727751
    3. Control of specific gene expression by gibberellin and brassinosteroid. Bouquin T, et al. Plant Physiol, 2001 Oct. PMID 11598220, Free PMC Article
    4. A peroxidase-dependent apoplastic oxidative burst in cultured Arabidopsis cells functions in MAMP-elicited defense. O'Brien JA, et al. Plant Physiol, 2012 Apr. PMID 22319074, Free PMC Article
    5. VH1/BRL2 receptor-like kinase interacts with vascular-specific adaptor proteins VIT and VIK to influence leaf venation. Ceserani T, et al. Plant J, 2009 Mar. PMID 19000166, Free PMC Article

    See all (10) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001198478.1

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    acts_upstream_of_or_within response to abscisic acid IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within response to brassinosteroid IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within response to gibberellin IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    acts_upstream_of_or_within response to gibberellin IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within unidimensional cell growth TAS
    Traceable Author Statement
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular region ISM
    Inferred from Sequence Model
    more info
    		  
    located_in mitochondrion HDA PubMed 
    located_in plant-type cell wall HDA PubMed 
    located_in plant-type cell wall IDA
    Inferred from Direct Assay
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    GAST1 protein homolog 1
    NP_001185407.1
    • GAST1 protein homolog 1 (GASA1); CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: Gibberellin-regulated family protein (TAIR:AT2G18420.1).
    NP_565116.1
    • GAST1 protein homolog 1 (GASA1); CONTAINS InterPro DOMAIN/s: Gibberellin regulated protein (InterPro:IPR003854); BEST Arabidopsis thaliana protein match is: Gibberellin-regulated family protein (TAIR:AT2G18420.1); Has 473 Blast hits to 473 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 473; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      28441501..28442435 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_106225.5 → NP_565116.1  GAST1 protein homolog 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565116.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      P46689, Q8W114, Q9LR14
      UniProtKB/TrEMBL
      A0A178W4S5, A0A5S9WUP0, Q8L7E2, Q8L8X0
      Conserved Domains (1) summary
      pfam02704
      Location:39 → 98
      GASA; Gibberellin regulated protein

    2. NM_001198478.1 → NP_001185407.1  GAST1 protein homolog 1 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001185407.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      F4I0N7, Q8L7E2, Q8L8X0
      Conserved Domains (1) summary
      pfam02704
      Location:38 → 97
      GASA; Gibberellin regulated protein
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    P46689.2

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