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    AT1G72820 Mitochondrial substrate carrier family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 843613, updated on 15-Feb-2024

    Summary

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    Gene symbol
    AT1G72820
    Gene description
    Mitochondrial substrate carrier family protein
    Primary source
    Araport:AT1G72820
    Locus tag
    AT1G72820
    See related
    TAIR:AT1G72820
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F3N23.2; F3N23_2
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    Genomic context

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    See AT1G72820 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    1
    Sequence:
    Chromosome: 1; NC_003070.9 (27402814..27404674)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene hydroxyproline-rich glycoprotein family protein Neighboring gene RNA-binding (RRM/RBD/RNP motifs) family protein Neighboring gene Pyridoxal-5'-phosphate-dependent enzyme family protein Neighboring gene nuclear factor Y, subunit A3 Neighboring gene Disease resistance protein (TIR-NBS-LRR class)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001334552.1
    NM_105940.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    is_active_in cellular_component ND
    No biological Data available
    more info
    		  

    General protein information

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    Preferred Names
    Mitochondrial substrate carrier family protein
    NP_565048.1
    • Mitochondrial substrate carrier family protein; FUNCTIONS IN: binding; INVOLVED IN: transport, mitochondrial transport, transmembrane transport; LOCATED IN: mitochondrial inner membrane, membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Mitochondrial carrier protein (InterPro:IPR002067), Mitochondrial substrate carrier (InterPro:IPR001993), Mitochondrial substrate/solute carrier (InterPro:IPR018108); BEST Arabidopsis thaliana protein match is: Mitochondrial substrate carrier family protein (TAIR:AT5G26200.1); Has 20856 Blast hits to 12399 proteins in 415 species: Archae - 0; Bacteria - 0; Metazoa - 8678; Fungi - 5994; Plants - 4095; Viruses - 0; Other Eukaryotes - 2089 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      27402814..27404674
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105940.4 → NP_565048.1  Mitochondrial substrate carrier family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_565048.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WGG1, A0A384KMH3, A0A5S9WTU4, A0A654ENH8, Q9SSP4
      Conserved Domains (1) summary
      pfam00153
      Location:132 → 219
      Mito_carr; Mitochondrial carrier protein

    2. NM_001334552.1 → NP_001321871.1  Mitochondrial substrate carrier family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WGG1, A0A384KMH3, A0A5S9WTU4, A0A654ENH8, Q9SSP4
      Conserved Domains (1) summary
      pfam00153
      Location:132 → 219
      Mito_carr; Mitochondrial carrier protein
    Nucleotide Protein
    Heading Accession and Version

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