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    CSLA10 cellulose synthase-like A10 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 839019, updated on 15-Feb-2024

    Summary

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    Gene symbol
    CSLA10
    Gene description
    cellulose synthase-like A10
    Primary source
    Araport:AT1G24070
    Locus tag
    AT1G24070
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATCSLA10; CELLULOSE SYNTHASE LIKE A10; cellulose synthase-like A10; T23E23.23; T23E23_23
    Summary
    encodes a gene similar to cellulose synthase
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    10
    Sequence:
    Chromosome: 1; NC_003070.9 (8516166..8519984, complement)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene Cysteine-rich protein Neighboring gene ncRNA Neighboring gene tRNA-Val Neighboring gene RNase H family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334
    2. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001332636.1
    NM_102254.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables cellulose synthase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    enables glucomannan 4-beta-mannosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    enables glycosyltransferase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		  
    Component Evidence Code Pubs
    located_in Golgi apparatus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    cellulose synthase-like A10
    NP_173818.1
    • cellulose synthase-like A10 (CSLA10); FUNCTIONS IN: cellulose synthase activity, transferase activity, transferring glycosyl groups; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 2 (InterPro:IPR001173); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT4G13410.1); Has 5025 Blast hits to 5019 proteins in 1468 species: Archae - 208; Bacteria - 3931; Metazoa - 29; Fungi - 85; Plants - 483; Viruses - 11; Other Eukaryotes - 278 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      8516166..8519984 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_102254.3 → NP_173818.1  cellulose synthase-like A10 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_173818.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GWQ3, Q9LR87
      UniProtKB/TrEMBL
      A0A068FJK1, A0A7G2DXT0
      Conserved Domains (2) summary
      cd06437
      Location:122 → 358
      CESA_CaSu_A2; Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex
      pfam13641
      Location:122 → 357
      Glyco_tranf_2_3; Glycosyltransferase like family 2

    2. NM_001332636.1 → NP_001320353.1  cellulose synthase-like A10 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A178WHE9, A0A1P8AMK2
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LR87.2

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