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    ydhK putative transporter YdhK [ Escherichia coli str. K-12 substr. MG1655 ]

    Gene ID: 946528, updated on 4-Feb-2024

    Summary

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    Gene symbol
    ydhK
    Gene description
    putative transporter YdhK
    Primary source
    ASAP:ABE-0005503
    Locus tag
    b1645
    See related
    ECOCYC:G6885
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
    Lineage
    Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
    Also known as
    ECK1641
    Summary
    YdhK is similar to B. cepacia fusaric acid resistance protein FusC. [More information is available at EcoGene: EG13945].
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    Genomic context

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    Sequence:
    NC_000913.3 (1722121..1724133)

    NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF1656 domain-containing protein YdhI Neighboring gene putative membrane fusion protein YdhJ Neighboring gene superoxide dismutase (Cu-Zn) Neighboring gene putative oxidoreductase YdhF

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000913.3

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Global topology analysis of the Escherichia coli inner membrane proteome. Daley DO, et al. Science, 2005 May 27. PMID 15919996
    2. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
    3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
    4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
    5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General gene information

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    Gene Ontology Provided by EcoCyc

    Function Evidence Code Pubs
    enables transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    is_active_in plasma membrane IBA
    Inferred from Biological aspect of Ancestor
    more info
    		  
    located_in plasma membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    putative transporter YdhK

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000913.3 Reference assembly

      Range
      1722121..1724133
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NP_416162.1 putative transporter YdhK [Escherichia coli str. K-12 substr. MG1655]

      See identical proteins and their annotated locations for NP_416162.1

      Status: PROVISIONAL

      UniProtKB/TrEMBL
      A0A376WZQ8, A0A8T5Y7P5
      Conserved Domains (1) summary
      pfam04632
      Location:21 → 663
      FUSC; Fusaric acid resistance protein family
    Nucleotide Protein
    Heading Accession and Version

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