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    AT1G64710 GroES-like zinc-binding alcohol dehydrogenase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 842779, updated on 7-Sep-2023

    Summary

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    Gene symbol
    AT1G64710
    Gene description
    GroES-like zinc-binding alcohol dehydrogenase family protein
    Primary source
    Araport:AT1G64710
    Locus tag
    AT1G64710
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F13O11.3; F13O11_3
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    Genomic context

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    Location:
    chromosome: 1
    Exon count:
    7
    Sequence:
    Chromosome: 1; NC_003070.9 (24044686..24046621)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene branchless trichome Neighboring gene DUF4228 domain protein Neighboring gene Polyketide cyclase/dehydrase and lipid transport superfamily protein Neighboring gene miscRNA Neighboring gene alpha-1 tubulin Neighboring gene ncRNA Neighboring gene deletion of SUV3 suppressor 1(I)

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Advanced proteomic analyses yield a deep catalog of ubiquitylation targets in Arabidopsis. Kim DY, et al. Plant Cell, 2013 May. PMID 23667124, Free PMC Article
    2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334
    3. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_001084304.1
    NM_001334177.1
    NM_105146.6

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in cytoplasm ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    GroES-like zinc-binding alcohol dehydrogenase family protein
    NP_001077773.1
    • GroES-like zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G32780.1); Has 31850 Blast hits to 31834 proteins in 3141 species: Archae - 706; Bacteria - 20375; Metazoa - 1244; Fungi - 2231; Plants - 4096; Viruses - 3; Other Eukaryotes - 3195 (source: NCBI BLink).
    NP_176652.3
    • GroES-like zinc-binding dehydrogenase family protein; FUNCTIONS IN: oxidoreductase activity, zinc ion binding; INVOLVED IN: oxidation reduction; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: GroES-like (InterPro:IPR011032), Alcohol dehydrogenase GroES-like (InterPro:IPR013154), Alcohol dehydrogenase, zinc-containing, conserved site (InterPro:IPR002328), Alcohol dehydrogenase, C-terminal (InterPro:IPR013149), Alcohol dehydrogenase superfamily, zinc-containing (InterPro:IPR002085); BEST Arabidopsis thaliana protein match is: GroES-like zinc-binding dehydrogenase family protein (TAIR:AT1G32780.1); Has 32712 Blast hits to 32690 proteins in 3136 species: Archae - 724; Bacteria - 20870; Metazoa - 1276; Fungi - 2315; Plants - 4127; Viruses - 3; Other Eukaryotes - 3397 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      24044686..24046621
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_105146.6 → NP_176652.3  GroES-like zinc-binding alcohol dehydrogenase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      F4I880, Q8VZ49, Q9XIS0
      UniProtKB/TrEMBL
      A0A5S9WS31

    2. NM_001084304.1 → NP_001077773.1  GroES-like zinc-binding alcohol dehydrogenase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001077773.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9WS31, A8MR36
      Conserved Domains (2) summary
      cd08301
      Location:1 → 356
      alcohol_DH_plants; Plant alcohol dehydrogenase
      PLN02740
      Location:1 → 357
      PLN02740; Alcohol dehydrogenase-like

    3. NM_001334177.1 → NP_001323423.1  GroES-like zinc-binding alcohol dehydrogenase family protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A1P8AX34, A0A5S9WS31
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8VZ49.1

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