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    PEN3 putative pentacyclic triterpene synthase 3 [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 833612, updated on 15-Oct-2023

    Summary

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    Gene symbol
    PEN3
    Gene description
    putative pentacyclic triterpene synthase 3
    Primary source
    Araport:AT5G36150
    Locus tag
    AT5G36150
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    ATPEN3; MAB16.10; MAB16_10; putative pentacyclic triterpene synthase 3
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    Genomic context

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    See PEN3 in Genome Data Viewer
    Location:
    chromosome: 5
    Exon count:
    14
    Sequence:
    Chromosome: 5; NC_003076.8 (14220634..14226211, complement)

    Chromosome 5 - NC_003076.8Genomic Context describing neighboring genes Neighboring gene Cytochrome P450 superfamily protein Neighboring gene cytochrome P450, family 716, subfamily A, polypeptide 2 Neighboring gene ncRNA Neighboring gene Tyrosine transaminase family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003076.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Molecular cloning and expression in yeast of 2,3-oxidosqualene-triterpenoid cyclases from Arabidopsis thaliana. Husselstein-Muller T, et al. Plant Mol Biol, 2001 Jan. PMID 11247608
    2. Arabidopsis plasmodesmal proteome. Fernandez-Calvino L, et al. PLoS One, 2011 Apr 20. PMID 21533090, Free PMC Article
    3. Sequence and analysis of chromosome 5 of the plant Arabidopsis thaliana. Tabata S, et al. Nature, 2000 Dec 14. PMID 11130714

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables lupeol synthase activity ISS
    Inferred from Sequence or Structural Similarity
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in triterpenoid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in lipid droplet IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  
    located_in plasmodesma HDA PubMed 

    General protein information

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    Preferred Names
    putative pentacyclic triterpene synthase 3
    NP_001318680.1
    • putative pentacyclic triterpene synthase 3 (PEN3); CONTAINS InterPro DOMAIN/s: Terpene synthase, conserved site (InterPro:IPR002365), Terpenoid cylases/protein prenyltransferase alpha-alpha toroid (InterPro:IPR008930), Squalene cyclase (InterPro:IPR018333), Prenyltransferase/squalene oxidase (InterPro:IPR001330); BEST Arabidopsis thaliana protein match is: baruol synthase 1 (TAIR:AT4G15370.1); Has 1967 Blast hits to 1902 proteins in 558 species: Archae - 4; Bacteria - 834; Metazoa - 81; Fungi - 233; Plants - 606; Viruses - 0; Other Eukaryotes - 209 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003076.8 Reference assembly

      Range
      14220634..14226211 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001344127.1 → NP_001318680.1  putative pentacyclic triterpene synthase 3 [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LVY2
      UniProtKB/TrEMBL
      A0A178UH52

    2. NM_123006.4 → NP_198464.4  putative pentacyclic triterpene synthase 3 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_198464.4

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q9LVY2
      UniProtKB/TrEMBL
      A0A178UH52
      Conserved Domains (2) summary
      PLN03012
      Location:1 → 758
      PLN03012; Camelliol C synthase
      cd02892
      Location:99 → 752
      SQCY_1; Squalene cyclase (SQCY) domain subgroup 1; found in class II terpene cyclases that have an alpha 6 - alpha 6 barrel fold. Squalene cyclase (SQCY) and 2,3-oxidosqualene cyclase (OSQCY) are integral membrane proteins that catalyze a cationic cyclization ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LVY2.2

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