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    AT4G28430 Reticulon family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828960, updated on 15-Feb-2024

    Summary

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    Gene symbol
    AT4G28430
    Gene description
    Reticulon family protein
    Primary source
    Araport:AT4G28430
    Locus tag
    AT4G28430
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F20O9.110; F20O9_110
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (14057631..14059864)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Tyrosine transaminase family protein Neighboring gene Tyrosine transaminase family protein Neighboring gene Nucleic acid-binding, OB-fold-like protein Neighboring gene WD repeat and SOF domain-containing protein 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198
    2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_118985.3

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Reticulon family protein
    NP_567809.1
    • Reticulon family protein; INVOLVED IN: biological_process unknown; LOCATED IN: endoplasmic reticulum, chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Reticulon (InterPro:IPR003388); BEST Arabidopsis thaliana protein match is: Reticulon family protein (TAIR:AT2G20590.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      14057631..14059864
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_118985.3 → NP_567809.1  Reticulon family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_567809.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      O49452, Q0WU41, Q8LDS3
      UniProtKB/TrEMBL
      A0A5S9XWR2, A0A654FTR1, A0A7G2F1P2
      Conserved Domains (1) summary
      pfam02453
      Location:196 → 352
      Reticulon; Reticulon
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8LDS3.2

    Gene LinkOut

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