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    TRM11 uncharacterized protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 828401, updated on 15-Feb-2024

    Summary

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    Gene symbol
    TRM11
    Gene description
    uncharacterized protein
    Primary source
    Araport:AT4G23020
    Locus tag
    AT4G23020
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    F7H19.210; F7H19_210; TON1 Recruiting Motif 11
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    4
    Sequence:
    Chromosome: 4; NC_003075.7 (12066173..12068624, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Calcineurin-like metallo-phosphoesterase superfamily protein Neighboring gene uncharacterized protein Neighboring gene UDP-galactose transporter 2 Neighboring gene MATE efflux family protein Neighboring gene Ubiquitin-like superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 4 of the plant Arabidopsis thaliana. Mayer K, et al. Nature, 1999 Dec 16. PMID 10617198
    2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001203878.1
    NM_118431.5

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    uncharacterized protein
    NP_001190807.1
    • unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11780.1).
    NP_194033.4
    • unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G11780.1); Has 146 Blast hits to 146 proteins in 40 species: Archae - 0; Bacteria - 16; Metazoa - 17; Fungi - 4; Plants - 67; Viruses - 20; Other Eukaryotes - 22 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      12066173..12068624 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_001203878.1 → NP_001190807.1  uncharacterized protein AT4G23020 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_001190807.1

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XUZ8, A0A654FS50, F4JMR3

    2. NM_118431.5 → NP_194033.4  uncharacterized protein AT4G23020 [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194033.4

      Status: REVIEWED

      UniProtKB/TrEMBL
      A0A5S9XUZ8, A0A654FS50, A0A7G2F000, F4JMR2
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Other Literature Sources
    Molecular Biology Databases