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    AT3G05675 BTB/POZ domain-containing protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 819735, updated on 15-Feb-2024

    Summary

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    Gene symbol
    AT3G05675
    Gene description
    BTB/POZ domain-containing protein
    Primary source
    Araport:AT3G05675
    Locus tag
    AT3G05675
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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    Genomic context

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    Location:
    chromosome: 3
    Exon count:
    3
    Sequence:
    Chromosome: 3; NC_003074.8 (1657758..1660429, complement)

    Chromosome 3 - NC_003074.8Genomic Context describing neighboring genes Neighboring gene receptor like protein 33 Neighboring gene RING/U-box protein Neighboring gene ncRNA Neighboring gene embryo defective 2016 Neighboring gene Cystatin/monellin superfamily protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003074.8

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 3 of the plant Arabidopsis thaliana. Salanoubat M, et al. Nature, 2000 Dec 14. PMID 11130713
    2. Multi-omics network-based functional annotation of unknown Arabidopsis genes. Depuydt T, et al. Plant J, 2021 Nov. PMID 34562334

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    NM_001337598.1
    NM_111441.3
    NM_180187.2

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables molecular_function ND
    No biological Data available
    more info
    		  
    Process Evidence Code Pubs
    involved_in protein ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in nucleus ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    BTB/POZ domain-containing protein
    NP_566255.1
    • BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10800.1); Has 259 Blast hits to 259 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).
    NP_850518.1
    • BTB/POZ domain-containing protein; CONTAINS InterPro DOMAIN/s: BTB/POZ (InterPro:IPR013069), BTB/POZ fold (InterPro:IPR011333), BTB/POZ-like (InterPro:IPR000210); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G10800.1); Has 259 Blast hits to 259 proteins in 17 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 257; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003074.8 Reference assembly

      Range
      1657758..1660429 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_111441.3 → NP_566255.1  BTB/POZ domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_566255.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WNA3, Q8LFC6, Q8RX01
      UniProtKB/TrEMBL
      A0A178VMR2, A0A5S9X9E8
      Conserved Domains (1) summary
      cl02518
      Location:20 → 131
      BTB; BTB/POZ domain

    2. NM_001337598.1 → NP_001325506.1  BTB/POZ domain-containing protein [Arabidopsis thaliana]

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WNA3, Q8LFC6, Q8RX01
      UniProtKB/TrEMBL
      A0A178VMR2, A0A5S9X9E8
      Conserved Domains (1) summary
      cl02518
      Location:20 → 131
      BTB; BTB/POZ domain

    3. NM_180187.2 → NP_850518.1  BTB/POZ domain-containing protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_850518.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q0WNA3, Q8LFC6, Q8RX01
      UniProtKB/TrEMBL
      A0A178VMR2, A0A5S9X9E8
      Conserved Domains (1) summary
      cl02518
      Location:20 → 131
      BTB; BTB/POZ domain
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8RX01.1

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