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    reep5.L receptor accessory protein 5 L homeolog [ Xenopus laevis (African clawed frog) ]

    Gene ID: 734752, updated on 25-Jan-2024

    Summary

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    Official Symbol
    reep5.L
    Official Full Name
    receptor accessory protein 5 L homeolog
    Primary source
    Xenbase:XB-GENE-944540
    Locus tag
    XELAEV_18008004mg
    See related
    EnsemblRapid:ENSXLAG00005029983
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Xenopus laevis
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
    Also known as
    reep5
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    Genomic context

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    Location:
    chromosome: 1L
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (187777861..187799961)
    100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (174629319..174651596)

    Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene mutated in colorectal cancers L homeolog Neighboring gene decapping mRNA 2 L homeolog Neighboring gene signal recognition particle 19kDa L homeolog Neighboring gene adenomatous polyposis coli L homeolog

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Protein interactomes of protein phosphatase 2A B55 regulatory subunits reveal B55-mediated regulation of replication protein A under replication stress. Wang F, et al. Sci Rep, 2018 Feb 8. PMID 29422626, Free PMC Article
    2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
    3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    Clone Names

    • MGC130879

    Gene Ontology Provided by Xenbase

    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		  
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    receptor accessory protein 5 L homeolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001096221.1 → NP_001089690.1  receptor accessory protein 5 L homeolog

      See identical proteins and their annotated locations for NP_001089690.1

      Status: PROVISIONAL

      Source sequence(s)
      BC106341
      UniProtKB/TrEMBL
      A0A974I4Z5, Q3KQ84
      Related
      ENSXLAP00005089771.1, ENSXLAT00005091446.1
      Conserved Domains (1) summary
      pfam03134
      Location:55 → 143
      TB2_DP1_HVA22; TB2/DP1, HVA22 family

    RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Xenopus_laevis_v10.1 Primary Assembly

    Genomic

    1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

      Range
      187777861..187799961
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_041582974.1 → XP_041438908.1  receptor accessory protein 5 L homeolog isoform X1

      UniProtKB/TrEMBL
      A0A8J1MBD7
      Related
      ENSXLAP00005089619.1, ENSXLAT00005091289.1
      Conserved Domains (1) summary
      cl19882
      Location:4 → 144
      TB2_DP1_HVA22; TB2/DP1, HVA22 family
    Nucleotide Protein Strain
    Heading Accession and Version

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