RpL38 Ribosomal protein L38 [Drosophila melanogaster (fruit fly)] - Gene

Summary

Official Symbol: RpL38provided by FlyBase
Official Full Name: Ribosomal protein L38provided by FlyBase
Primary source: FLYBASE:FBgn0040007
Locus tag: Dmel_CG18001
See related: AllianceGenome:FB:FBgn0040007
Gene type: protein coding
RefSeq status: REVIEWED
Organism: Drosophila melanogaster
Lineage: Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Brachycera; Muscomorpha; Ephydroidea; Drosophilidae; Drosophila; Sophophora
Also known as: 41Af; 41Ag; BcDNA:RE42506; CG18001; CG40278; Dmel\CG18001; E-2b; GroupIV; l(2)41Af; l(2)41Ag; l(2)41Ai; l(2)EMS4-72; l(2)EMS45-72; l(2R)A'; L38e; M(2)41A; M(2)S2; M(2)S3; Rp L38; Rpl38
Summary: A structural constituent of ribosome. Predicted to be involved in ribonucleoprotein complex assembly. Located in cytosolic ribosome. Is expressed in adult heart. Orthologous to human RPL38 (ribosomal protein L38). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs: all
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Annotation release	Status	Assembly	Chr	Location
Release 6.54	current	Release 6 plus ISO1 MT (GCF_000001215.4)	2R	NT_033778.4 (4515388..4516458, complement)
Release 5.57	previous assembly	Release 5 (GCF_000001215.2)	2R	NT_033778.3 (402893..403963, complement)

Chromosome 2R - NT_033778.4 Genomic Context describing neighboring genes

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

RpL38, located in the centric heterochromatin of chromosome 2, was analyzed genetically.
Title: Genetic analysis of RpL38 and RpL5, two minute genes located in the centric heterochromatin of chromosome 2 of Drosophila melanogaster.

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

Annotated by Drosophila Heterochromatin Genome Project, Lawrence Berkeley National Lab, http://www.dhgp.org

Function	Evidence Code	Pubs
enables structural constituent of ribosome	HDA more info	PubMed
enables structural constituent of ribosome	IBA Inferred from Biological aspect of Ancestor more info
enables structural constituent of ribosome	IDA Inferred from Direct Assay more info	PubMed
enables structural constituent of ribosome	IEA Inferred from Electronic Annotation more info
enables structural constituent of ribosome	TAS Traceable Author Statement more info	PubMed

Process	Evidence Code	Pubs
involved_in cytoplasmic translation	IC Inferred by Curator more info	PubMed
involved_in cytoplasmic translation	TAS Traceable Author Statement more info	PubMed
involved_in protein-RNA complex assembly	IBA Inferred from Biological aspect of Ancestor more info
involved_in translation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of cytosolic large ribosomal subunit	IBA Inferred from Biological aspect of Ancestor more info
part_of cytosolic large ribosomal subunit	TAS Traceable Author Statement more info	PubMed
located_in cytosolic ribosome	HDA more info	PubMed
located_in cytosolic ribosome	IDA Inferred from Direct Assay more info	PubMed
located_in ribosome	IEA Inferred from Electronic Annotation more info

Names: CG18001-PA; CG18001-PB; Minute(2)41A; RpL38-PA; RpL38-PB; enhancer on chromosome 2, complementation group b; lethal(2)41Af; nipped; ribosomal protein 38

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