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    APE_RS05150 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase [ Aeropyrum pernix K1 ]

    Gene ID: 1446076, updated on 29-Sep-2023

    Summary

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    Gene symbol
    APE_RS05150
    Gene description
    tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase
    Locus tag
    APE_RS05150
    Gene type
    protein coding
    Organism
    Aeropyrum pernix K1 (strain: K1, culture-collection: NBRC:100138, type-material: type strain of Aeropyrum pernix)
    Lineage
    Archaea; Thermoproteota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Aeropyrum
    Old locus tag
    APE1530; APE_1530.1
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    Genomic context

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    Sequence:
    NC_000854.2 (966238..967608, complement)

    NC_000854.2Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene archaetidylinositol phosphate synthase Neighboring gene glycosyltransferase Neighboring gene FUN14 domain-containing protein Neighboring gene translation initiation factor IF-2 subunit beta Neighboring gene hypothetical protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_000854.2

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Characterization of a whole set of tRNA molecules in an aerobic hyper-thermophilic Crenarchaeon, Aeropyrum pernix K1. Yamazaki S, et al. DNA Res, 2005. PMID 16769697
    2. Proteome analysis of an aerobic hyperthermophilic crenarchaeon, Aeropyrum pernix K1. Yamazaki S, et al. Mol Cell Proteomics, 2006 May. PMID 16455681
    3. Complete genome sequence of an aerobic hyper-thermophilic crenarchaeon, Aeropyrum pernix K1. Kawarabayasi Y, et al. DNA Res, 1999 Apr 30. PMID 10382966
    4. Enzymatic modification of tRNAs: MiaB is an iron-sulfur protein. Pierrel F, et al. J Biol Chem, 2002 Apr 19. PMID 11882645
    5. Identification of the miaB gene, involved in methylthiolation of isopentenylated A37 derivatives in the tRNA of Salmonella typhimurium and Escherichia coli. Esberg B, et al. J Bacteriol, 1999 Dec. PMID 10572129, Free PMC Article

    See all (6) citations in PubMed

    GeneRIFs: Gene References Into Functions

    General protein information

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    Preferred Names
    tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase
    WP_148679063.1

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_000854.2 Reference assembly

      Range
      966238..967608 complement
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      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. WP_148679063.1 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase [Aeropyrum pernix]

      UniProtKB/TrEMBL
      Q9YBR9
      Conserved Domains (1) summary
      TIGR00089
      Location:25 → 449
      TIGR00089; radical SAM methylthiotransferase, MiaB/RimO family

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