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    Xbp1 X-box binding protein 1 [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100689062, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Xbp1
    Gene description
    X-box binding protein 1
    Locus tag
    I79_012500
    See related
    Ensembl:ENSCGRG00015040284
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Also known as
    Xbp-1
    Orthologs
    human mouse all
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    Genomic context

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    See Xbp1 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003614142.1 (34363..38370, complement)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) 1 Unlocalized Scaffold NW_023276807.1 (99386858..99390860, complement)

    NW_003614142.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 117 Neighboring gene E3 ubiquitin-protein ligase ZNRF3 Neighboring gene 60S acidic ribosomal protein P0-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Unraveling the Chinese hamster ovary cell line transcriptome by next-generation sequencing. Becker J, et al. J Biotechnol, 2011 Dec 10. PMID 21945585

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II transcription regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    X-box-binding protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001244047.1 → NP_001230976.1  X-box-binding protein 1 isoform 2

      See identical proteins and their annotated locations for NP_001230976.1

      Status: PROVISIONAL

      Source sequence(s)
      FJ499339
      UniProtKB/TrEMBL
      A0A8C2MKM5, B8Y928
      Conserved Domains (1) summary
      cd14691
      Location:63 → 119
      bZIP_XBP1; Basic leucine zipper (bZIP) domain of X-box binding protein 1 (XBP1) and similar proteins: a DNA-binding and dimerization domain

    2. NM_001244049.1 → NP_001230978.1  X-box-binding protein 1 isoform 1

      See identical proteins and their annotated locations for NP_001230978.1

      Status: PROVISIONAL

      Source sequence(s)
      EF635250
      UniProtKB/TrEMBL
      B3F885, G3HNZ9
      Related
      ENSCGRP00015057073.1, ENSCGRT00015055167.1
      Conserved Domains (1) summary
      cd14691
      Location:63 → 119
      bZIP_XBP1; Basic leucine zipper (bZIP) domain of X-box binding protein 1 (XBP1) and similar proteins: a DNA-binding and dimerization domain

    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003614142.1 Reference CriGri_1.0 Primary Assembly

      Range
      34363..38370 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NW_023276807.1 Alternate CriGri-PICRH-1.0

      Range
      99386858..99390860 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

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