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    CRYGEP crystallin gamma E, pseudogene [ Homo sapiens (human) ]

    Gene ID: 200575, updated on 8-Nov-2023

    Summary

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    Official Symbol
    CRYGEPprovided by HGNC
    Official Full Name
    crystallin gamma E, pseudogeneprovided by HGNC
    Primary source
    HGNC:HGNC:2412
    See related
    Ensembl:ENSG00000290929 AllianceGenome:HGNC:2412
    Gene type
    pseudo
    RefSeq status
    INFERRED
    Organism
    Homo sapiens
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
    Also known as
    G2; CCL; CRYG5; CRYGEP1; D2S1472
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    Genomic context

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    Location:
    2q33.3
    Annotation release Status Assembly Chr Location
    RS_2023_10 current GRCh38.p14 (GCF_000001405.40) 2 NC_000002.12 (208108164..208112668, complement)
    RS_2023_10 current T2T-CHM13v2.0 (GCF_009914755.1) 2 NC_060926.1 (208588206..208592697, complement)
    105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 2 NC_000002.11 (208972888..208977392, complement)

    Chromosome 2 - NC_000002.12Genomic Context describing neighboring genes Neighboring gene ribosomal protein L12 pseudogene 17 Neighboring gene uncharacterized LOC105373854 Neighboring gene ATAC-STARR-seq lymphoblastoid active region 17050 Neighboring gene small nucleolar RNA U13 Neighboring gene OCT4-NANOG-H3K27ac-H3K4me1 hESC enhancer GRCh37_chr2:208976214-208976954 Neighboring gene uncharacterized LOC100507443 Neighboring gene crystallin gamma D Neighboring gene crystallin gamma C

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Activation of the gamma E-crystallin pseudogene in the human hereditary Coppock-like cataract. Brakenhoff RH, et al. Hum Mol Genet, 1994 Feb. PMID 8004095
    2. Structural and evolutionary relationships among five members of the human gamma-crystallin gene family. Meakin SO, et al. Mol Cell Biol, 1985 Jun. PMID 4033658, Free PMC Article
    3. Gamma-crystallins of the human eye lens: expression analysis of five members of the gene family. Meakin SO, et al. Mol Cell Biol, 1987 Aug. PMID 3670288, Free PMC Article
    4. Toward a complete human genome sequence. Sanger Center, et al. Genome Res, 1998 Nov. PMID 9847074

    GeneRIFs: Gene References Into Functions

    Phenotypes

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    Review eQTL and phenotype association data in this region using PheGenI

    Variation

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    See studies and variants in dbVar

    See Variation Viewer (GRCh37.p13)

    See Variation Viewer (GRCh38)

    General gene information

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    Markers

    Other Names

    • crystallin, gamma D pseudogene
    • crystallin, gamma E pseudogene 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    Genomic

    1. NG_002762.5 

      Range
      101..4605
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    RefSeqs of Annotated Genomes: GCF_000001405.40-RS_2023_10

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCh38.p14 Primary Assembly

    Genomic

    1. NC_000002.12 Reference GRCh38.p14 Primary Assembly

      Range
      208108164..208112668 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Reference GRCh38.p14 PATCHES

    Genomic

    1. NW_018654710.1 Reference GRCh38.p14 PATCHES

      Range
      106458..110962 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate T2T-CHM13v2.0

    Genomic

    1. NC_060926.1 Alternate T2T-CHM13v2.0

      Range
      208588206..208592697 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases