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    ATS2 Phospholipid/glycerol acyltransferase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 829181, updated on 7-Sep-2023

    Summary

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    Gene symbol
    ATS2
    Gene description
    Phospholipid/glycerol acyltransferase family protein
    Primary source
    Araport:AT4G30580
    Locus tag
    AT4G30580
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    EMB1995; EMBRYO DEFECTIVE 1995; F17I23.80; F17I23_80; LPAT1; lysophosphatidic acid acyltransferase 1; PHOSPHOLIPID/GLYCEROL ACYLTRANSFERASE
    Summary
    Encodes a plastidic lysophosphatidic acid acyltransferase (LPAAT). Is critical for chloroplasts phosphatidic acid biosynthesis. The null allele is embryo lethal.
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    Genomic context

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    Location:
    chromosome: 4
    Exon count:
    7
    Sequence:
    Chromosome: 4; NC_003075.7 (14932105..14934528, complement)

    Chromosome 4 - NC_003075.7Genomic Context describing neighboring genes Neighboring gene Class I glutamine amidotransferase-like superfamily protein Neighboring gene cyclic nucleotide gated channel 9 Neighboring gene Glucose-1-phosphate adenylyltransferase family protein Neighboring gene early nodulin-like protein 12 Neighboring gene signal recognition particle receptor alpha subunit family protein

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003075.7

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Loss of plastidic lysophosphatidic acid acyltransferase causes embryo-lethality in Arabidopsis. Yu B, et al. Plant Cell Physiol, 2004 May. PMID 15169931
    2. Plastid lysophosphatidyl acyltransferase is essential for embryo development in Arabidopsis. Kim HU, et al. Plant Physiol, 2004 Mar. PMID 14976237, Free PMC Article
    3. A mutation in the LPAT1 gene suppresses the sensitivity of fab1 plants to low temperature. Kim HU, et al. Plant Physiol, 2010 Jul. PMID 20488893, Free PMC Article
    4. Phosphatidylglycerol biosynthesis in chloroplasts of Arabidopsis mutants deficient in acyl-ACP glycerol-3- phosphate acyltransferase. Xu C, et al. Plant J, 2006 Jul. PMID 16774646
    5. Arabidopsis ATG8-INTERACTING PROTEIN1 is involved in autophagy-dependent vesicular trafficking of plastid proteins to the vacuole. Michaeli S, et al. Plant Cell, 2014 Oct. PMID 25281689, Free PMC Article

    See all (11) citations in PubMed

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    Interactions

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    Products Interactant Other Gene Complex Source Pubs Description

    General gene information

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    Homology

    NM_119204.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables 1-acylglycerol-3-phosphate O-acyltransferase activity IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    enables 1-acylglycerol-3-phosphate O-acyltransferase activity IGI
    Inferred from Genetic Interaction
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in CDP-diacylglycerol biosynthetic process IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    involved_in CDP-diacylglycerol biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    acts_upstream_of_or_within embryo development ending in seed dormancy IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    acts_upstream_of_or_within embryo development ending in seed dormancy NAS
    Non-traceable Author Statement
    more info
    		  
    acts_upstream_of_or_within phosphatidylglycerol biosynthetic process IMP
    Inferred from Mutant Phenotype
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in chloroplast HDA PubMed 
    located_in chloroplast IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in chloroplast ISM
    Inferred from Sequence Model
    more info
    		  
    located_in chloroplast envelope HDA PubMed 
    located_in chloroplast membrane IDA
    Inferred from Direct Assay
    more info
    		 PubMed 
    located_in plasma membrane HDA PubMed 
    located_in plastid HDA PubMed 

    General protein information

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    Preferred Names
    Phospholipid/glycerol acyltransferase family protein
    NP_194787.2
    • ATS2; FUNCTIONS IN: 1-acylglycerol-3-phosphate O-acyltransferase activity, acyltransferase activity; INVOLVED IN: metabolic process, phosphatidylglycerol biosynthetic process, embryo development ending in seed dormancy; LOCATED IN: chloroplast, chloroplast envelope; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipid/glycerol acyltransferase (InterPro:IPR002123), 1-acyl-sn-glycerol-3-phosphate acyltransferase (InterPro:IPR004552); BEST Arabidopsis thaliana protein match is: Phospholipid/glycerol acyltransferase family protein (TAIR:AT3G05510.1); Has 12571 Blast hits to 12571 proteins in 2517 species: Archae - 0; Bacteria - 9130; Metazoa - 376; Fungi - 153; Plants - 151; Viruses - 0; Other Eukaryotes - 2761 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003075.7 Reference assembly

      Range
      14932105..14934528 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_119204.4 → NP_194787.2  Phospholipid/glycerol acyltransferase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_194787.2

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8GXU8, Q9M0A2
      UniProtKB/TrEMBL
      A0A178V0Y8, A0A5S9XY19, A0A654FU97
      Conserved Domains (1) summary
      PLN02901
      Location:145 → 356
      PLN02901; 1-acyl-sn-glycerol-3-phosphate acyltransferase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q8GXU8.1

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