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    AT1G06090 Fatty acid desaturase family protein [ Arabidopsis thaliana (thale cress) ]

    Gene ID: 837118, updated on 7-Sep-2023

    Summary

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    Gene symbol
    AT1G06090
    Gene description
    Fatty acid desaturase family protein
    Primary source
    Araport:AT1G06090
    Locus tag
    AT1G06090
    Gene type
    protein coding
    RefSeq status
    REVIEWED
    Organism
    Arabidopsis thaliana (ecotype: Columbia)
    Lineage
    Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
    Also known as
    T21E18.14; T21E18_14
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    Genomic context

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    See AT1G06090 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    5
    Sequence:
    Chromosome: 1; NC_003070.9 (1846701..1849693)

    Chromosome 1 - NC_003070.9Genomic Context describing neighboring genes Neighboring gene ncRNA Neighboring gene delta 9 desaturase 1 Neighboring gene Fatty acid desaturase family protein Neighboring gene SKP1/ASK-interacting protein 16

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_003070.9

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Sequence and analysis of chromosome 1 of the plant Arabidopsis thaliana. Theologis A, et al. Nature, 2000 Dec 14. PMID 11130712

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Homology

    NM_100490.4

    Gene Ontology Provided by TAIR

    Function Evidence Code Pubs
    enables oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA
    Inferred from Electronic Annotation
    more info
    		  
    Process Evidence Code Pubs
    involved_in unsaturated fatty acid biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in mitochondrion ISM
    Inferred from Sequence Model
    more info
    		  

    General protein information

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    Preferred Names
    Fatty acid desaturase family protein
    NP_172099.1
    • Fatty acid desaturase family protein; FUNCTIONS IN: oxidoreductase activity, oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water; INVOLVED IN: oxidation reduction, lipid metabolic process; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Fatty acid desaturase, type 1, core (InterPro:IPR015876), Fatty acid desaturase, type 1 (InterPro:IPR005804); BEST Arabidopsis thaliana protein match is: Fatty acid desaturase family protein (TAIR:AT1G06120.1); Has 3429 Blast hits to 3429 proteins in 832 species: Archae - 0; Bacteria - 1555; Metazoa - 791; Fungi - 234; Plants - 106; Viruses - 4; Other Eukaryotes - 739 (source: NCBI BLink).

    NCBI Reference Sequences (RefSeq)

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    Genome Annotation

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference assembly

    Genomic

    1. NC_003070.9 Reference assembly

      Range
      1846701..1849693
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. NM_100490.4 → NP_172099.1  Fatty acid desaturase family protein [Arabidopsis thaliana]

      See identical proteins and their annotated locations for NP_172099.1

      Status: REVIEWED

      UniProtKB/Swiss-Prot
      Q8LDI2, Q9LND9
      UniProtKB/TrEMBL
      A0A178W7H3, A0A7G2DR24
      Conserved Domains (1) summary
      PLN02220
      Location:1 → 299
      PLN02220; delta-9 acyl-lipid desaturase
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q9LND9.1

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