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OT_ostta04g01280 TATA element modulatory factor 1 TATA binding [ Ostreococcus tauri ]

Gene ID: 9834238, updated on 18-Aug-2023

Summary

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Gene symbol
OT_ostta04g01280
Gene description
TATA element modulatory factor 1 TATA binding
Locus tag
OT_ostta04g01280
Gene type
protein coding
RNA name
TATA element modulatory factor 1 TATA binding
RefSeq status
PROVISIONAL
Organism
Ostreococcus tauri (strain: RCC4221)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
Old locus tag
Ot04g01470
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Genomic context

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See OT_ostta04g01280 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_014429.2 (219876..222101, complement)

Chromosome 4 - NC_014429.2Genomic Context describing neighboring genes Neighboring gene Dolichol phosphate-mannose biosynthesis regulatory Neighboring gene Ribosomal protein S3, eukaryotic/archaeal Neighboring gene OB-fold nucleic acid binding domain, AA-tRNA synthetase-type Neighboring gene Insulin-like growth factor binding protein,N-terminal

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014429.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies. Blanc-Mathieu R, et al. BMC Genomics, 2014 Dec 13. PMID 25494611, Free PMC Article
  2. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Derelle E, et al. Proc Natl Acad Sci U S A, 2006 Aug 1. PMID 16868079, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Names
TATA element modulatory factor 1 TATA binding

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014429.2 Reference assembly

    Range
    219876..222101 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003078617.2 → XP_003078665.2  TATA element modulatory factor 1 TATA binding [Ostreococcus tauri]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A090LZX9, A0A1Y5IIC1
    Conserved Domains (2) summary
    pfam12325
    Location:631 → 720
    TMF_TATA_bd; TATA element modulatory factor 1 TATA binding
    cl26511
    Location:66 → 598
    Neuromodulin_N; Gap junction protein N-terminal region
Nucleotide Protein
Heading Accession and Version

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