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OT_ostta04g02830 Voltage-dependent channel, four helix bundle domain [ Ostreococcus tauri ]

Gene ID: 9833921, updated on 16-Nov-2023

Summary

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Gene symbol
OT_ostta04g02830
Gene description
Voltage-dependent channel, four helix bundle domain
Locus tag
OT_ostta04g02830
Gene type
protein coding
RNA name
Voltage-dependent channel, four helix bundle domain
RefSeq status
PROVISIONAL
Organism
Ostreococcus tauri (strain: RCC4221)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
Old locus tag
Ot04g02990
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Genomic context

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See OT_ostta04g02830 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
1
Sequence:
Chromosome: 4; NC_014429.2 (495280..500643)

Chromosome 4 - NC_014429.2Genomic Context describing neighboring genes Neighboring gene RNA methyltransferase, RsmD Neighboring gene P-loop containing nucleoside triphosphate hydrolase Neighboring gene Cytochrome b561/ferric reductase transmembrane Neighboring gene Zinc finger, Dof-type

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014429.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies. Blanc-Mathieu R, et al. BMC Genomics, 2014 Dec 13. PMID 25494611, Free PMC Article
  2. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Derelle E, et al. Proc Natl Acad Sci U S A, 2006 Aug 1. PMID 16868079, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables voltage-gated sodium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monoatomic ion transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of voltage-gated sodium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
Voltage-dependent channel, four helix bundle domain

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014429.2 Reference assembly

    Range
    495280..500643
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022984519.1 → XP_022838780.1  Voltage-dependent channel, four helix bundle domain [Ostreococcus tauri]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A090N370, A0A1Y5IIT4
    Conserved Domains (1) summary
    pfam00520
    Location:1502 → 1737
    Ion_trans; Ion transport protein
Nucleotide Protein
Heading Accession and Version

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