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OT_ostta03g03070 tRNA isopentenyltransferase [ Ostreococcus tauri ]

Gene ID: 9833095, updated on 16-Nov-2023

Summary

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Gene symbol
OT_ostta03g03070
Gene description
tRNA isopentenyltransferase
Locus tag
OT_ostta03g03070
Gene type
protein coding
RNA name
tRNA isopentenyltransferase
RefSeq status
PROVISIONAL
Organism
Ostreococcus tauri (strain: RCC4221)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
Old locus tag
Ot03g03070
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Genomic context

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See OT_ostta03g03070 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_014428.2 (507587..508957)

Chromosome 3 - NC_014428.2Genomic Context describing neighboring genes Neighboring gene Pyridoxal phosphate-dependent transferase, major region, subdomain 2 Neighboring gene Zinc finger, PHD-finger Neighboring gene 3-oxo-5-alpha-steroid 4-dehydrogenase,C-terminal Neighboring gene unnamed product

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014428.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies. Blanc-Mathieu R, et al. BMC Genomics, 2014 Dec 13. PMID 25494611, Free PMC Article
  2. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Derelle E, et al. Proc Natl Acad Sci U S A, 2006 Aug 1. PMID 16868079, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tRNA dimethylallyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tRNA modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
tRNA isopentenyltransferase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014428.2 Reference assembly

    Range
    507587..508957
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022984792.1 → XP_022838520.1  tRNA isopentenyltransferase [Ostreococcus tauri]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A090M4V7, A0A1Y5I745
    Conserved Domains (1) summary
    cl28623
    Location:7 → 436
    PLN02840; tRNA dimethylallyltransferase
Nucleotide Protein
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