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OT_ostta03g01680 Helicase, C-terminal [ Ostreococcus tauri ]

Gene ID: 9833003, updated on 16-Nov-2023

Summary

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Gene symbol
OT_ostta03g01680
Gene description
Helicase, C-terminal
Locus tag
OT_ostta03g01680
Gene type
protein coding
RNA name
Helicase, C-terminal
RefSeq status
PROVISIONAL
Organism
Ostreococcus tauri (strain: RCC4221)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
Old locus tag
Ot03g01640
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Genomic context

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See OT_ostta03g01680 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
1
Sequence:
Chromosome: 3; NC_014428.2 (282131..285553, complement)

Chromosome 3 - NC_014428.2Genomic Context describing neighboring genes Neighboring gene unnamed product Neighboring gene WD40/YVTN repeat-like-containing domain Neighboring gene Tetratricopeptide repeat Neighboring gene Methyltransferase domain

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014428.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies. Blanc-Mathieu R, et al. BMC Genomics, 2014 Dec 13. PMID 25494611, Free PMC Article
  2. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Derelle E, et al. Proc Natl Acad Sci U S A, 2006 Aug 1. PMID 16868079, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-5' DNA helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables four-way junction helicase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nucleic acid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA unwinding involved in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in double-strand break repair via homologous recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in chromosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
Helicase, C-terminal

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014428.2 Reference assembly

    Range
    282131..285553 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003078028.2 → XP_003078076.2  Helicase, C-terminal [Ostreococcus tauri]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A096P7A8, A0A1Y5I2Q4
    Conserved Domains (1) summary
    cl26641
    Location:175 → 1006
    RQC; RQC domain
Nucleotide Protein
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