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OT_ostta17g02320 P-loop containing nucleoside triphosphate hydrolase [ Ostreococcus tauri ]

Gene ID: 9831247, updated on 16-Nov-2023

Summary

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Gene symbol
OT_ostta17g02320
Gene description
P-loop containing nucleoside triphosphate hydrolase
Locus tag
OT_ostta17g02320
Gene type
protein coding
RNA name
P-loop containing nucleoside triphosphate hydrolase
RefSeq status
PROVISIONAL
Organism
Ostreococcus tauri (strain: RCC4221)
Lineage
Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Ostreococcus
Old locus tag
Ot17g02610
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Genomic context

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See OT_ostta17g02320 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
1
Sequence:
Chromosome: 17; NC_014442.2 (395025..396653, complement)

Chromosome 17 - NC_014442.2Genomic Context describing neighboring genes Neighboring gene DeoxyUTP pyrophosphatase Neighboring gene M-phase phosphoprotein 6 Neighboring gene Endonuclease/exonuclease/phosphatase Neighboring gene Endonuclease/exonuclease/phosphatase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014442.2

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. An improved genome of the model marine alga Ostreococcus tauri unfolds by assessing Illumina de novo assemblies. Blanc-Mathieu R, et al. BMC Genomics, 2014 Dec 13. PMID 25494611, Free PMC Article
  2. Genome analysis of the smallest free-living eukaryote Ostreococcus tauri unveils many unique features. Derelle E, et al. Proc Natl Acad Sci U S A, 2006 Aug 1. PMID 16868079, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
P-loop containing nucleoside triphosphate hydrolase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014442.2 Reference assembly

    Range
    395025..396653 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003083973.1 → XP_003084021.1  P-loop containing nucleoside triphosphate hydrolase [Ostreococcus tauri]

    See identical proteins and their annotated locations for XP_003084021.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A1Y5I7J0, A0A454XXR7, Q00T28
    Conserved Domains (2) summary
    cd02023
    Location:89 → 287
    UMPK; Uridine monophosphate kinase (UMPK, EC 2.7.1.48), also known as uridine kinase or uridine-cytidine kinase (UCK), catalyzes the reversible phosphoryl transfer from ATP to uridine or cytidine to yield UMP or CMP. In the primidine nucleotide-salvage pathway, ...
    pfam14681
    Location:305 → 524
    UPRTase; Uracil phosphoribosyltransferase
Nucleotide Protein
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