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DDA3937_RS00230 LysR family transcriptional regulator [ Dickeya dadantii 3937 ]

Gene ID: 9731433, discontinued on 23-Aug-2024
  • This record was discontinued.

Summary

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Gene symbol
DDA3937_RS00230
Gene description
LysR family transcriptional regulator
Locus tag
DDA3937_RS00230
Gene type
protein coding
Organism
Dickeya dadantii 3937 (strain: 3937)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Pectobacteriaceae; Dickeya
Old locus tag
Dda3937_01136
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Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014500.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genome sequence of the plant-pathogenic bacterium Dickeya dadantii 3937. Glasner JD, et al. J Bacteriol, 2011 Apr. PMID 21217001, Free PMC Article
  2. Molecular biology of the LysR family of transcriptional regulators. Schell MA. Annu Rev Microbiol, 1993. PMID 8257110
  3. Structure and function of the LysR-type transcriptional regulator (LTTR) family proteins. Maddocks SE, et al. Microbiology (Reading), 2008 Dec. PMID 19047729

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
LysR family transcriptional regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014500.1 Reference assembly

    Range
    54672..55562
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_013315753.1 LysR family transcriptional regulator [Dickeya dadantii]

    See identical proteins and their annotated locations for WP_013315753.1

    Conserved Domains (3) summary
    cd08422
    Location:92 → 288
    PBP2_CrgA_like; The C-terminal substrate binding domain of LysR-type transcriptional regulator CrgA and its related homologs, contains the type 2 periplasmic binding domain
    COG0583
    Location:3 → 293
    LysR; DNA-binding transcriptional regulator, LysR family [Transcription]
    pfam00126
    Location:7 → 63
    HTH_1; Bacterial regulatory helix-turn-helix protein, lysR family
Nucleotide Protein
Heading Accession and Version