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Eint_040950 signal recognition particle protein Srp54 [ Encephalitozoon intestinalis ATCC 50506 ]

Gene ID: 9698985, updated on 17-May-2024

Summary

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Gene symbol
Eint_040950
Gene description
signal recognition particle protein Srp54
Primary source
MicrosporidiaDB:Eint_040950
Locus tag
Eint_040950
See related
VEuPathDB:Eint_040950
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Encephalitozoon intestinalis ATCC 50506 (strain: ATCC 50506)
Lineage
Eukaryota; Fungi; Fungi incertae sedis; Microsporidia; Unikaryonidae; Encephalitozoon
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Genomic context

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See Eint_040950 in Genome Data Viewer
Location:
chromosome: IV
Exon count:
1
Sequence:
Chromosome: IV; NC_014418.1 (113919..115319)

Chromosome IV - NC_014418.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene homeobox domain-containing protein Neighboring gene uncharacterized protein Neighboring gene myosin heavy chain

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_014418.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The complete sequence of the smallest known nuclear genome from the microsporidian Encephalitozoon intestinalis. Corradi N, et al. Nat Commun, 2010 Sep 21. PMID 20865802, Free PMC Article
  2. Gain and loss of multiple functionally related, horizontally transferred genes in the reduced genomes of two microsporidian parasites. Pombert JF, et al. Proc Natl Acad Sci U S A, 2012 Jul 31. PMID 22802648, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 7S RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables endoplasmic reticulum signal peptide binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in SRP-dependent cotranslational protein targeting to membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in SRP-dependent cotranslational protein targeting to membrane, translocation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of signal recognition particle, endoplasmic reticulum targeting IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
signal recognition particle protein Srp54
XP_003072744.1
  • similar to ECU04_0980

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_014418.1 Reference assembly

    Range
    113919..115319
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003072698.1 → XP_003072744.1  signal recognition particle protein Srp54 [Encephalitozoon intestinalis ATCC 50506]

    See identical proteins and their annotated locations for XP_003072744.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    E0S6P9
    Conserved Domains (4) summary
    smart00963
    Location:9 → 85
    SRP54_N; SRP54-type protein, helical bundle domain
    COG0541
    Location:1 → 439
    Ffh; Signal recognition particle GTPase [Intracellular trafficking, secretion, and vesicular transport]
    pfam00448
    Location:100 → 291
    SRP54; SRP54-type protein, GTPase domain
    pfam02978
    Location:322 → 421
    SRP_SPB; Signal peptide binding domain
Nucleotide Protein
Heading Accession and Version

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