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CPC735_030930 hypothetical protein [ Coccidioides posadasii C735 delta SOWgp ]

Gene ID: 9695397, updated on 12-Jun-2024

Summary

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Gene symbol
CPC735_030930
Gene description
hypothetical protein
Primary source
FungiDB:CPC735_030930
Locus tag
CPC735_030930
See related
VEuPathDB:CPC735_030930
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Coccidioides posadasii C735 delta SOWgp (strain: C735 delta SOWgp)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Onygenales incertae sedis; Coccidioides
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Genomic context

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See CPC735_030930 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
1

NW_003316003.1Genomic Context describing neighboring genes Neighboring gene Fungal Zn binuclear cluster domain containing protein Neighboring gene Aminopeptidase I zinc metalloprotease family protein Neighboring gene nucleolar RNA-binding family protein Neighboring gene tRNA intron endonuclease, catalytic C-terminal domain containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003316003.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives. Sharpton TJ, et al. Genome Res, 2009 Oct. PMID 19717792, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA endonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in maturation of SSU-rRNA IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ribosomal small subunit biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of preribosome, small subunit precursor IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_003069902.1
  • encoded by transcript CPC735_030930A
    predicted by combiner

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003316003.1 Reference assembly

    Range
    2802890..2804203
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003069856.1 → XP_003069902.1  hypothetical protein CPC735_030930 [Coccidioides posadasii C735 delta SOWgp]

    See identical proteins and their annotated locations for XP_003069902.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0J6F442, C5P4W7, E9DBJ5
    Conserved Domains (4) summary
    cd09876
    Location:17 → 130
    PIN_Nob1; PIN domain of eukaryotic ribosome assembly factor Nob1 and archaeal UPF0129 protein Ta0041-like homologs
    COG1439
    Location:16 → 331
    Nob1; rRNA maturation endonuclease Nob1 [Translation, ribosomal structure and biogenesis]
    pfam15017
    Location:191 → 238
    AF1Q; Drug resistance and apoptosis regulator
    pfam08772
    Location:285 → 356
    NOB1_Zn_bind; Nin one binding (NOB1) Zn-ribbon like
Nucleotide Protein
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