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CPC735_018810 hypothetical protein [ Coccidioides posadasii C735 delta SOWgp ]

Gene ID: 9692893, updated on 17-May-2024

Summary

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Gene symbol
CPC735_018810
Gene description
hypothetical protein
Primary source
FungiDB:CPC735_018810
Locus tag
CPC735_018810
See related
VEuPathDB:CPC735_018810
Gene type
protein coding
RNA name
hypothetical protein
RefSeq status
PROVISIONAL
Organism
Coccidioides posadasii C735 delta SOWgp (strain: C735 delta SOWgp)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Eurotiomycetes; Eurotiomycetidae; Onygenales; Onygenales incertae sedis; Coccidioides
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Genomic context

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See CPC735_018810 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
3

NW_003315985.1Genomic Context describing neighboring genes Neighboring gene cyclin domain containing protein Neighboring gene hypothetical protein Neighboring gene ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain containing protein Neighboring gene 60S ribosomal protein L36

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003315985.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomic analyses of the human fungal pathogens Coccidioides and their relatives. Sharpton TJ, et al. Genome Res, 2009 Oct. PMID 19717792, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in intracellular anatomical structure IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
hypothetical protein
XP_003067422.1
  • encoded by transcript CPC735_018810A

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003315985.1 Reference assembly

    Range
    1636914..1641369
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003067376.1 → XP_003067422.1  hypothetical protein CPC735_018810 [Coccidioides posadasii C735 delta SOWgp]

    See identical proteins and their annotated locations for XP_003067422.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C5PDW6, E9D1N3
    Conserved Domains (6) summary
    smart00847
    Location:1033 → 1112
    HA2; Helicase associated domain (HA2) Add an annotation
    COG1643
    Location:546 → 1361
    HrpA; HrpA-like RNA helicase [Translation, ribosomal structure and biogenesis]
    cd00046
    Location:605 → 753
    DEXDc; DEAD-like helicases superfamily. A diverse family of proteins involved in ATP-dependent RNA or DNA unwinding. This domain contains the ATP-binding region.
    pfam00271
    Location:852 → 962
    Helicase_C; Helicase conserved C-terminal domain
    pfam05773
    Location:410 → 512
    RWD; RWD domain
    pfam07717
    Location:1155 → 1293
    OB_NTP_bind; Oligonucleotide/oligosaccharide-binding (OB)-fold
Nucleotide Protein
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