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SCHCODRAFT_02617834 tryptophan synthase [ Schizophyllum commune H4-8 ]

Gene ID: 9590355, updated on 17-May-2024

Summary

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Gene symbol
SCHCODRAFT_02617834
Gene description
tryptophan synthase
Locus tag
SCHCODRAFT_02617834
See related
FungiDB:SCHCODRAFT_02617834; VEuPathDB:SCHCODRAFT_02617834
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizophyllum commune H4-8 (strain: H4-8)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Schizophyllaceae; Schizophyllum
Old locus tag
SCHCODRAFT_75810
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Genomic context

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See SCHCODRAFT_02617834 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
5

NW_026089541.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene thiolase-like protein Neighboring gene NIC-domain-containing protein Neighboring gene LuxS/MPP-like metallohydrolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026089541.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Transcription Factor Roc1 Is a Key Regulator of Cellulose Degradation in the Wood-Decaying Mushroom Schizophyllum commune. Marian IM, et al. mBio, 2022 Jun 28. PMID 35604096, Free PMC Article
  2. Genome sequence of the model mushroom Schizophyllum commune. Ohm RA, et al. Nat Biotechnol, 2010 Sep. PMID 20622885

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tryptophan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in tryptophan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tryptophan synthase

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_026089541.1 Reference assembly

    Range
    820913..823909 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003033139.2 → XP_003033185.1  tryptophan synthase [Schizophyllum commune H4-8]

    See identical proteins and their annotated locations for XP_003033185.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D8Q3A5
    Conserved Domains (3) summary
    PRK04346
    Location:296 → 682
    PRK04346; tryptophan synthase subunit beta; Validated
    PRK13111
    Location:6 → 262
    trpA; tryptophan synthase subunit alpha; Provisional
    pfam00291
    Location:358 → 669
    PALP; Pyridoxal-phosphate dependent enzyme
Nucleotide Protein
Heading Accession and Version

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