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SCHCODRAFT_01039619 ATPase, V1 complex, subunit C [ Schizophyllum commune H4-8 ]

Gene ID: 9589713, updated on 17-May-2024

Summary

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Gene symbol
SCHCODRAFT_01039619
Gene description
ATPase, V1 complex, subunit C
Primary source
FungiDB:SCHCODRAFT_01039619
Locus tag
SCHCODRAFT_01039619
See related
VEuPathDB:SCHCODRAFT_01039619
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizophyllum commune H4-8 (strain: H4-8)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Schizophyllaceae; Schizophyllum
Old locus tag
SCHCODRAFT_64141
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Genomic context

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See SCHCODRAFT_01039619 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
8

NW_026089539.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene CBS-domain-containing protein Neighboring gene uncharacterized protein Neighboring gene Rhodanese-like protein Neighboring gene uncharacterized protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026089539.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Transcription Factor Roc1 Is a Key Regulator of Cellulose Degradation in the Wood-Decaying Mushroom Schizophyllum commune. Marian IM, et al. mBio, 2022 Jun 28. PMID 35604096, Free PMC Article
  2. Genome sequence of the model mushroom Schizophyllum commune. Ohm RA, et al. Nat Biotechnol, 2010 Sep. PMID 20622885

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton-transporting ATPase activity, rotational mechanism IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of vacuolar proton-transporting V-type ATPase, V1 domain IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATPase, V1 complex, subunit C

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_026089539.1 Reference assembly

    Range
    3130461..3132262 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003037064.2 → XP_003037110.1  ATPase, V1 complex, subunit C [Schizophyllum commune H4-8]

    See identical proteins and their annotated locations for XP_003037110.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D8PN60
    Conserved Domains (2) summary
    cd14785
    Location:57 → 77
    V-ATPase_C; 3-helical coiled coil [structural motif]
    pfam03223
    Location:8 → 374
    V-ATPase_C; V-ATPase subunit C
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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