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SCHCODRAFT_02747928 uncharacterized protein [ Schizophyllum commune H4-8 ]

Gene ID: 9589175, updated on 17-May-2024

Summary

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Gene symbol
SCHCODRAFT_02747928
Gene description
uncharacterized protein
Primary source
FungiDB:SCHCODRAFT_02747928
Locus tag
SCHCODRAFT_02747928
See related
VEuPathDB:SCHCODRAFT_02747928
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizophyllum commune H4-8 (strain: H4-8)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Schizophyllaceae; Schizophyllum
Old locus tag
SCHCODRAFT_72294
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Genomic context

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See SCHCODRAFT_02747928 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
5

NW_026089542.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene proteasome-domain-containing protein Neighboring gene N-terminal nucleophile aminohydrolase Neighboring gene uncharacterized protein Neighboring gene glycoside hydrolase family 105 protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026089542.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Transcription Factor Roc1 Is a Key Regulator of Cellulose Degradation in the Wood-Decaying Mushroom Schizophyllum commune. Marian IM, et al. mBio, 2022 Jun 28. PMID 35604096, Free PMC Article
  2. Genome sequence of the model mushroom Schizophyllum commune. Ohm RA, et al. Nat Biotechnol, 2010 Sep. PMID 20622885

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome regulatory particle IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome regulatory particle, lid subcomplex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
uncharacterized protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_026089542.1 Reference assembly

    Range
    2431007..2432049
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003036745.2 → XP_003036791.1  uncharacterized protein SCHCODRAFT_02747928 [Schizophyllum commune H4-8]

    See identical proteins and their annotated locations for XP_003036791.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D8PJW8
    Conserved Domains (1) summary
    pfam10075
    Location:98 → 235
    CSN8_PSD8_EIF3K; CSN8/PSMD8/EIF3K family
Nucleotide Protein
Heading Accession and Version

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