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SCHCODRAFT_081205 T-complex protein 1 [ Schizophyllum commune H4-8 ]

Gene ID: 9587524, updated on 17-May-2024

Summary

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Gene symbol
SCHCODRAFT_081205
Gene description
T-complex protein 1
Primary source
FungiDB:SCHCODRAFT_081205
Locus tag
SCHCODRAFT_081205
See related
VEuPathDB:SCHCODRAFT_081205
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizophyllum commune H4-8 (strain: H4-8)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Schizophyllaceae; Schizophyllum
Old locus tag
SCHCODRAFT_81205
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Genomic context

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See SCHCODRAFT_081205 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
7

NW_026089538.1Genomic Context describing neighboring genes Neighboring gene N-myristoyl transferase Neighboring gene uncharacterized protein Neighboring gene UFD1-domain-containing protein Neighboring gene Piwi-domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026089538.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Transcription Factor Roc1 Is a Key Regulator of Cellulose Degradation in the Wood-Decaying Mushroom Schizophyllum commune. Marian IM, et al. mBio, 2022 Jun 28. PMID 35604096, Free PMC Article
  2. Genome sequence of the model mushroom Schizophyllum commune. Ohm RA, et al. Nat Biotechnol, 2010 Sep. PMID 20622885

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chaperonin-containing T-complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
T-complex protein 1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_026089538.1 Reference assembly

    Range
    2994453..2996357 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003034936.1 → XP_003034982.1  T-complex protein 1 [Schizophyllum commune H4-8]

    See identical proteins and their annotated locations for XP_003034982.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D8PVP7
    Conserved Domains (2) summary
    cd03338
    Location:2 → 506
    TCP1_delta; TCP-1 (CTT or eukaryotic type II) chaperonin family, delta subunit. Chaperonins are involved in productive folding of proteins. They share a common general morphology, a double toroid of 2 stacked rings. In contrast to bacterial group I chaperonins ...
    pfam00118
    Location:14 → 509
    Cpn60_TCP1; TCP-1/cpn60 chaperonin family
Nucleotide Protein
Heading Accession and Version

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