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SCHCODRAFT_016105 4A/4B type thioredoxin-like protein [ Schizophyllum commune H4-8 ]

Gene ID: 9587467, updated on 17-May-2024

Summary

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Gene symbol
SCHCODRAFT_016105
Gene description
4A/4B type thioredoxin-like protein
Primary source
FungiDB:SCHCODRAFT_016105
Locus tag
SCHCODRAFT_016105
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Schizophyllum commune H4-8 (strain: H4-8)
Lineage
Eukaryota; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Agaricales; Schizophyllaceae; Schizophyllum
Old locus tag
SCHCODRAFT_16105
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Genomic context

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See SCHCODRAFT_016105 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
6

NW_026089544.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene uncharacterized protein Neighboring gene DUF1212-domain-containing protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_026089544.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The Transcription Factor Roc1 Is a Key Regulator of Cellulose Degradation in the Wood-Decaying Mushroom Schizophyllum commune. Marian IM, et al. mBio, 2022 Jun 28. PMID 35604096, Free PMC Article
  2. Genome sequence of the model mushroom Schizophyllum commune. Ohm RA, et al. Nat Biotechnol, 2010 Sep. PMID 20622885

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U4/U6 x U5 tri-snRNP complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of U5 snRNP IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
4A/4B type thioredoxin-like protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_026089544.1 Reference assembly

    Range
    1347542..1348247 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003030901.1 → XP_003030947.1  4A/4B type thioredoxin-like protein [Schizophyllum commune H4-8]

    See identical proteins and their annotated locations for XP_003030947.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D8Q7L0
    Conserved Domains (1) summary
    PLN00410
    Location:1 → 142
    PLN00410; U5 snRNP protein, DIM1 family; Provisional
Nucleotide Protein
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