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VDBG_02235 ATP-dependent permease PDR12 [ Verticillium alfalfae VaMs.102 ]

Gene ID: 9533898, updated on 21-Dec-2023

Summary

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Gene symbol
VDBG_02235
Gene description
ATP-dependent permease PDR12
Locus tag
VDBG_02235
Gene type
protein coding
RNA name
ATP-dependent permease PDR12
RefSeq status
PROVISIONAL
Organism
Verticillium alfalfae VaMs.102 (strain: VaMs.102)
Lineage
Eukaryota; Fungi; Dikarya; Ascomycota; Pezizomycotina; Sordariomycetes; Hypocreomycetidae; Glomerellales; Plectosphaerellaceae; Verticillium
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Genomic context

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See VDBG_02235 in Genome Data Viewer
Location:
chromosome: Unknown
Exon count:
5

NW_003315037.1Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene dienelactone hydrolase family protein Neighboring gene pleiotropic ABC efflux transporter of multiple drugs Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003315037.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Names
ATP-dependent permease PDR12

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NW_003315037.1 Reference assembly

    Range
    2503204..2504862
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003008001.1 → XP_003008047.1  ATP-dependent permease PDR12 [Verticillium alfalfae VaMs.102]

    See identical proteins and their annotated locations for XP_003008047.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    C9S9R3
    Conserved Domains (2) summary
    pfam14510
    Location:35 → 123
    ABC_trans_N; ABC-transporter extracellular N-terminal
    cl21455
    Location:141 → 348
    P-loop_NTPase; P-loop containing Nucleoside Triphosphate Hydrolases
Nucleotide Protein
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Gene LinkOut

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Molecular Biology Databases