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yecR lipoprotein YecR [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946386, updated on 19-Sep-2024

Summary

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Official Symbol
yecR
Official Full Name
lipoprotein YecR
Primary source
ECOCYC:G7035
Locus tag
b1904
See related
ASAP:ABE-0006338
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1903
Summary
First 15 aa are a type II signal peptide. [More information is available at EcoGene: EG14036]. yecR was shown to be regulated by the FlhDC flagellar transcriptional regulator . [More information is available at EcoCyc: G7035].
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Genomic context

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Sequence:
NC_000913.3 (1988222..1988545)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene DUF2766 domain-containing protein YecJ Neighboring gene uncharacterized protein AzuC Neighboring gene ferritin iron storage protein Neighboring gene DUF2492 domain-containing protein YecH

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic architecture of intrinsic antibiotic susceptibility. Girgis HS, et al. PLoS One, 2009 May 20. PMID 19462005, Free PMC Article
  2. Binding and transcriptional activation of non-flagellar genes by the Escherichia coli flagellar master regulator FlhD2C2. Stafford GP, et al. Microbiology (Reading), 2005 Jun. PMID 15941987, Free PMC Article
  3. Prediction of lipoprotein signal peptides in Gram-negative bacteria. Juncker AS, et al. Protein Sci, 2003 Aug. PMID 12876315, Free PMC Article
  4. Fine-tuning the prediction of sequences cleaved by signal peptidase II: a curated set of proven and predicted lipoproteins of Escherichia coli K-12. Gonnet P, et al. Proteomics, 2004 Jun. PMID 15174130
  5. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
lipoprotein YecR

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1988222..1988545
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416417.1 lipoprotein YecR [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416417.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5B9AJC7, A0A7L7E539
    Conserved Domains (1) summary
    pfam13992
    Location:26 → 98
    YecR; YecR-like lipoprotein
Nucleotide Protein
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