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yoaI protein YoaI [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 946294, updated on 27-Aug-2023

Summary

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Gene symbol
yoaI
Gene description
protein YoaI
Primary source
ASAP:ABE-0005947
Locus tag
b1788
See related
ECOCYC:G6974
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK1786
Summary
Immunoblots of chromosomal SPA-tagged YoaI failed to show a band, indicating that if yoaI is a gene, it is not expressed under the conditions tested (Hemm, 2008). [More information is available at EcoGene: EG14417].
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Genomic context

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Sequence:
NC_000913.3 (1874078..1874182, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene diguanylate cyclase DgcJ Neighboring gene mischarged aminoacyl-tRNA deacylase Neighboring gene DUF441 domain-containing inner membrane protein YeaL Neighboring gene DNA-binding transcriptional repressor NimR Neighboring gene 2-nitroimidazole exporter

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Membranome: a database for proteome-wide analysis of single-pass membrane proteins. Lomize AL, et al. Nucleic Acids Res, 2017 Jan 4. PMID 27510400, Free PMC Article
  2. Small membrane proteins found by comparative genomics and ribosome binding site models. Hemm MR, et al. Mol Microbiol, 2008 Dec. PMID 19121005, Free PMC Article
  3. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article
  4. The complete genome sequence of Escherichia coli K-12. Blattner FR, et al. Science, 1997 Sep 5. PMID 9278503
  5. Escherichia coli K-12: a cooperatively developed annotation snapshot--2005. Riley M, et al. Nucleic Acids Res, 2006. PMID 16397293, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by EcoCyc

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane RCA
inferred from Reviewed Computational Analysis
more info
 PubMed 

General protein information

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Preferred Names
protein YoaI

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    1874078..1874182 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_416302.2 protein YoaI [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_416302.2

    Status: PROVISIONAL

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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