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pdxS glutamine amidotransferase for pyridoxal phosphate synthesis; pyridoxal 5'-phosphate synthase complex, synthase subunit [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 939988, updated on 12-Feb-2021

Summary

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Gene symbol
pdxS
Gene description
glutamine amidotransferase for pyridoxal phosphate synthesis; pyridoxal 5'-phosphate synthase complex, synthase subunit
Locus tag
BSU_00110
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU00110
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Genomic context

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Sequence:
NC_000964.3 (19062..19946)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene inosine-monophosphate dehydrogenase Neighboring gene D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5) Neighboring gene glutamine amidotransferase for pyridoxal phosphate synthesis; pyridoxal 5'-phosphate synthase complex, glutamine amidotransferase subunit PdxT Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Reaction mechanism of pyridoxal 5'-phosphate synthase. Detection of an enzyme-bound chromophoric intermediate. Raschle T, et al. J Biol Chem, 2007 Mar 2. PMID 17189272
  2. On the two components of pyridoxal 5'-phosphate synthase from Bacillus subtilis. Raschle T, et al. J Biol Chem, 2005 Sep 16. PMID 16030023
  3. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  4. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  5. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

General protein information

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Preferred Names
glutamine amidotransferase for pyridoxal phosphate synthesis; pyridoxal 5'-phosphate synthase complex, synthase subunit
NP_387892.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 14762015, 15771487, 15911615, 16157873, 17144654; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_387892.1 glutamine amidotransferase for pyridoxal phosphate synthesis; pyridoxal 5'-phosphate synthase complex, synthase subunit [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_387892.1

    Status: PROVISIONAL

    Conserved Domains (1) summary
    PRK04180
    Location:3 → 294
    PRK04180; pyridoxal 5'-phosphate synthase lyase subunit PdxS
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P37527.3

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases