U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

ybdO putative phage protein; prophage region 1 [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938493, updated on 12-Feb-2021

Summary

Go to the top of the page Help
Gene symbol
ybdO
Gene description
putative phage protein; prophage region 1
Locus tag
BSU_02050
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU02050
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000964.3 (225064..226248)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene putative protein kinase Neighboring gene putative phage protein; prophage region 1 Neighboring gene putative amino acid permease Neighboring gene sporulation-specific SASP protein

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
putative phage protein; prophage region 1
NP_388087.1
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 15033535; Product type h: extrachromosomal origin

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388087.1 putative phage protein; prophage region 1 [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388087.1

    Status: PROVISIONAL

    Conserved Domains (1) summary
    pfam16226
    Location:63 → 387
    DUF4885; Domain of unknown function (DUF4885)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O31437.1

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases
Research Materials