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opuBC choline ABC transporter (choline-binding lipoprotein) [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938475, updated on 12-Feb-2021

Summary

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Gene symbol
opuBC
Gene description
choline ABC transporter (choline-binding lipoprotein)
Locus tag
BSU_33710
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU33710
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Genomic context

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Sequence:
NC_000964.3 (3460503..3461423, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene putative methyl-accepting transducer Neighboring gene choline ABC transporter (permease) Neighboring gene choline ABC transporter (permease) Neighboring gene choline ABC transporter (ATP-binding protein)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
choline ABC transporter (choline-binding lipoprotein)
NP_391251.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 9925583, 10216873; Product type t: transporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3460503..3461423 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391251.1 choline ABC transporter (choline-binding lipoprotein) [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391251.1

    Status: PROVISIONAL

    Conserved Domains (1) summary
    cd13608
    Location:35 → 299
    PBP2_OpuCC_like; Substrate-binding protein OpuCC of ABC-type osmoregulatory transporter and related proteins; the type 2 periplasmic-binding protein fold
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q45462.2

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases