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rhgX rhamnogalacturonan exolyase [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 936081, updated on 4-Apr-2024

Summary

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Gene symbol
rhgX
Gene description
rhamnogalacturonan exolyase
Locus tag
BSU_07060
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU07060
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Genomic context

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Sequence:
NC_000964.3 (772142..773980)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene putative enzyme Neighboring gene putative integral inner membrane component Neighboring gene rhamnogalacturonan endolyase Neighboring gene rhamnogalacturonan acetylesterase Neighboring gene beta-galacturonidase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

General protein information

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Preferred Names
rhamnogalacturonan exolyase
NP_388587.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 16781735, 17449691, 19193638; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388587.1 rhamnogalacturonan exolyase [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388587.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1KW90, D4G668
    Conserved Domains (1) summary
    cd10318
    Location:8 → 587
    RGL11; Rhamnogalacturonan lyase of the polysaccharide lyase family 11
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O31527.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases