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LOC9315291 josephin-like protein [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9315291, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9315291
Gene description
josephin-like protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302552.1 (13667364..13667960)

NW_003302552.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC9315290 Neighboring gene phosphomethylpyrimidine synthase, chloroplastic Neighboring gene josephin-like protein Neighboring gene sodium-dependent phosphate transport protein 1, chloroplastic Neighboring gene uncharacterized LOC110229411

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302552 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cysteine-type deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
josephin-like protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302552.1 Reference v.1.0 Primary Assembly

    Range
    13667364..13667960
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_021029043.1 → XP_020884702.1  josephin-like protein

    Conserved Domains (1) summary
    pfam02099
    Location:11 → 137
    Josephin
Nucleotide Protein
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