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LOC9309044 transcription factor UNE10 [ Arabidopsis lyrata subsp. lyrata ]

Gene ID: 9309044, updated on 21-Dec-2023

Summary

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Gene symbol
LOC9309044
Gene description
transcription factor UNE10
Locus tag
ARALYDRAFT_912247
Gene type
protein coding
RefSeq status
MODEL
Organism
Arabidopsis lyrata subsp. lyrata (sub-species: lyrata)
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Brassicaceae; Camelineae; Arabidopsis
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Genomic context

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Location:
chromosome: Un
Exon count:
6
Annotation release Status Assembly Chr Location
101 current v.1.0 (GCF_000004255.2) Unplaced Scaffold NW_003302550.1 (25068060..25070605, complement)

NW_003302550.1Genomic Context describing neighboring genes Neighboring gene pectinesterase inhibitor 9 Neighboring gene uncharacterized LOC9309043 Neighboring gene type III polyketide synthase C Neighboring gene probable plastid-lipid-associated protein 11 Neighboring gene probable mitochondrial import inner membrane translocase subunit TIM21

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_003302550 Unplaced Scaffold Reference v.1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor UNE10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Arabidopsis lyrata subsp. lyrata Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference v.1.0 Primary Assembly

Genomic

  1. NW_003302550.1 Reference v.1.0 Primary Assembly

    Range
    25068060..25070605 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002875002.2 → XP_002875048.1  transcription factor UNE10

    See identical proteins and their annotated locations for XP_002875048.1

    UniProtKB/TrEMBL
    D7M5T4
    Conserved Domains (1) summary
    cd00083
    Location:220 → 269
    HLH; Helix-loop-helix domain, found in specific DNA- binding proteins that act as transcription factors; 60-100 amino acids long. A DNA-binding basic region is followed by two alpha-helices separated by a variable loop region; HLH forms homo- and heterodimers, ...
Nucleotide Protein
Heading Accession and Version

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